Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0755 |
Symbol | |
ID | 5188743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 828142 |
End bp | 828933 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590588 |
Product | condensin subunit ScpA |
Protein accession | YP_001271356 |
Protein GI | 148543986 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000908175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC AAGTGCAACC ACAAAATCTA TTTCAACCAG TCATAAAAGT TCATGACTTT GAAGGGTCAC TAGATTTATT ACTTCATTTA ATAAAGCAAT CTGAAATGGA TATTTATGAT ATTCAGATTT CGCAAATTAC AAGCCAATAC CTTGATTACC TTCACCAAAT GCAAAGCCAC CAATTAGAAG TCGCGGGTGA ATATTTTGTA ATGGCTGCGA CTCTGATGGA CATTAAAAGT CAGATGCTGT TACCTTCGCC GCCAGTATTG GATGATGAGC CAGAAGTAGA GGAGATTGAT CCCCGGCAAG AATTAGTGGA ACAGCTTTTG GAATATCAGC GTTATAAAAA AGCGGCAGAT CGATTAAAAG ATAAAGAAAA TCTGCGTCAA CAGGAGTATA CTCGGCCAGC AATGCAGGTT CCTCGTGAAA TGGTAAAATC TCATGTGGAG CCGGGCATCA AATTAACGGA TTTGCAACAA GCTTTTGCAG CAGTTCTCCG CCGCCAACAA TTAGCTACTC CATTAGTTGA AACTGTTGCA GCTGAAAAAG TAAGCATTGG GCAACAAATG AACCACGTGA TTGAAATTGT TCATGATGGT CCGGTTAGAT TTGAAGACTT GTTTAAAGAT TTACATACTC GTGATGGCTT AGTTACAACT TTTTTAGCAA TTCTTGAACT AGCAAAACAT CAAGCAATTA CTATTAACCA AGGTGGCTTG TTTGAACCAA TAATTTTAGT GGAGGGACCT AAGAGTGACG AATACGAAAC TAACCAACCA AGCGCAGATT GA
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Protein sequence | MNKQVQPQNL FQPVIKVHDF EGSLDLLLHL IKQSEMDIYD IQISQITSQY LDYLHQMQSH QLEVAGEYFV MAATLMDIKS QMLLPSPPVL DDEPEVEEID PRQELVEQLL EYQRYKKAAD RLKDKENLRQ QEYTRPAMQV PREMVKSHVE PGIKLTDLQQ AFAAVLRRQQ LATPLVETVA AEKVSIGQQM NHVIEIVHDG PVRFEDLFKD LHTRDGLVTT FLAILELAKH QAITINQGGL FEPIILVEGP KSDEYETNQP SAD
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