| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0743 |
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| Symbol | |
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| ID | 5189913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 813548 |
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| End bp | 814690 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590576 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001271344 |
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| Protein GI | 148543974 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000129687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA GCAAGAAAAA AGACATTGTT ATTTCTAACA GCGCCGATTT CGATCAACAA
GAATATGACA CCGCAGTTGG TAAGTTAATT CGTAATTACA AGAAGCAAAA GCAGATTGAA
TACGATGAAT TAACTACTAA AATTGCTAAA CCATTTGAAT TGAACGCTGA CGGAATTGAC
AATTTACTTC AAAATATTGA AGATGCCGGA ATTAGTGTTG TCGATGAAAA TGGGGATCCA
GATCCTCGTG CTTTAAAAGC TACTGAAAAA TTCTCACAAT CTGCTATGAA GGATACATCA
GCTCCAACTG GAGTTAAAAT TAATGATCCT GTGCGGATGT ATTTGAAGGA AATTGGTCGT
GTAAATCTTT TGACGGCTGA TGAAGAAGTT CAGCTTGCTT TACGGATTGA AAAAGGTGAT
GAAGTAGCTA AACAAGAATT AGCTGAGGCT AACTTACGGT TAGTTGTTTC AATTGCAAAG
CGTTATGTTG GCCGTGGGAT GCAGTTTCTT GACTTAATCC AGGAAGGTAA CATGGGACTT
ATGAAGGCCG TTGAAAAATT CGATTATCGG CGGGGATTTA AGTTCTCTAC TTATGCTACC
TGGTGGATTC GTCAGGCTAT TACACGGGCA ATTGCTGATC AAGCCCGGAC AATTCGGATT
CCGGTTCATA TGGTTGAAAC TATTAACAAA TTGATCCGGA TTCAACGGCA ATTACTTCAA
GATTTAGGTC GTGAACCGTT ACCAGAAGAA ATTGGTGCAG AAATGGATAT GCCAACTGAG
AAAGTGCGGA ATATTCTTAA AATTGCCCAA GAACCAGTTT CACTTGAAAC GCCTATTGGT
GAAGAGGACG ATTCTCATTT AGGAGACTTT ATTGAAGATC AAGATGCAAC GAGTCCAGCT
GACCATGCTG CTTATGAAAT GATGAAGAAG CAACTTGAAA ATGTTTTGGA TACGTTAACC
GATCGTGAAG AGAACGTTCT TCGGCTTCGT TTTGGCTTAG ATGATGGTCG AACACGGACC
CTTGAAGAAG TTGGAAAAGT CTTCGGGGTA ACGCGGGAAC GGATTCGTCA GATTGAAGCT
AAGGCGCTCC GAAAATTACG TCACCCATCA CGTTCTAAGC AATTAAAAGA TTTCTTAGAA
TAA
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| Protein sequence | MAKSKKKDIV ISNSADFDQQ EYDTAVGKLI RNYKKQKQIE YDELTTKIAK PFELNADGID
NLLQNIEDAG ISVVDENGDP DPRALKATEK FSQSAMKDTS APTGVKINDP VRMYLKEIGR
VNLLTADEEV QLALRIEKGD EVAKQELAEA NLRLVVSIAK RYVGRGMQFL DLIQEGNMGL
MKAVEKFDYR RGFKFSTYAT WWIRQAITRA IADQARTIRI PVHMVETINK LIRIQRQLLQ
DLGREPLPEE IGAEMDMPTE KVRNILKIAQ EPVSLETPIG EEDDSHLGDF IEDQDATSPA
DHAAYEMMKK QLENVLDTLT DREENVLRLR FGLDDGRTRT LEEVGKVFGV TRERIRQIEA
KALRKLRHPS RSKQLKDFLE
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