Gene Lreu_0742 details

Gene Information

• Locus tag: Lreu_0742
• ID: 5189778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 811681
• End bp: 813546
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640590575
• Product: DNA primase
• Protein accession: YP_001271343
• Protein GI: 148543973
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00012137
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA TACCGCGTAA TGTAATTGAT GAAATACGAA ATTCAGTTGA TATTGGTGAT 
GTAATTGGGC GCTATGTCCA ACTGCATCAG GCTGGAAAAA ATCTAATTGG GTTATGTCCC 
TTTCATGATG AAAAGACCCC CTCTTTTTCA GTGAATGAGG AAAAACAATT TTTCTATTGT 
TTTGGATGTC ACCGGAGCGG AAATGTATTT CAATTTTTGA TGGAGTTAAA GCATATCGAT 
TTTGTCGATG CAGTTAAGGA GATCGCTAAC GATAGTAATA TCAAGATTCC TGAACAATAT 
GTTAGCGTTC CGGCTAAACC ATCAAATAAC GAGAATCGAC AGCTGTTTGA TCTTCATGAT 
AAAGCAGCTA AACTTTATCA CCATATATTG GTAAATACAC CGGCTGGGCA AGTTGCACTT 
AATTATTTAA AAAAACGGGG AATGAGTGAA GAACTGATTG AGCAATTTGG CTTAGGCTAT 
GCTCCTGATC AGCGAATCTT AAAGCCGTTC TTCCAGCAGC AAAAAGTTGA TTACCAATTG 
CTAAGAAAAA GTGGGCTTTT TAGTGAAGAC CAACAGGGAG AGTTGCGAGA CCGGTTCATT 
GAACGGATAA TGTATCCGAT AAAAAATGGT CAAGGGCAGG TAATTGCTTT TTCTGGTCGA 
TTAATCGATA CCAGTAAAAC AAATTTACCT AAATATTTAA ATAGTCCTGA GACACCAATT 
TTCAACAAAC GACGGACATT ATTTAATTTT GACGTTGCAC GAAAAGCAGC CCGTAAAGAT 
GGTCGATTAT ACTTATTTGA AGGATTTATG GATGTGATCT CGGCCTTTGC CGCAGGAATC 
GAAAATGGAA TTGCTTCAAT GGGGACCAGT TTTACCGAAG AGCAAGTAGC GATTATTGGT 
CGTGCTACAA AGCAATTAGA TATTTGCTAT GATGGAGATC AACCGGGACA AAATGCAATT 
GATCGTGCAA TTAGCCTCGT TAATGATCAT CGACCTAATC AGCTCCAGGT GAAGGTTGTC 
CAATTACCAG CTGGGATTGA TCCAGATGAA TATGTTCAAA AGTATGGTCC ACAGCAATTT 
AACGCCTATC TTACTAATAA GGAAGAAACA ACAACAGAAT TTTACCTGCG CTTTTTAAGA 
AATGGGAAGA ATTTAGATAA TCAGAATGAG CTGATGCAAT ATCTTAATCA AGCACTGAAG 
GTAATTGCTC AAGTTCAAGC TCCCTTAGAA GAAGATATGT ACTTGCAACG GTTAGCAAGT 
GAGTTCAATT TAGATCGGCA AACCTTAAAG ACGCAGTTAG ATCAATTGCG ACAGCAACTA 
GGAATTCATA ATCAGCCATG GACTAAGCAA CAGCCTTCAC TAGTGCGTCA TCAACAGTTT 
CAACAAACTA GTGAAGAAGA ACATCGAAAA GTTAAACTTA GTAGGACTGA ATTAGCGGAA 
CAGATCTTAC TAAGGTATAT GCTATATGAT CGTGAAGTGT GGATGCATGT AACATCAGAC 
CACGATTTTC ATTTTGCGCA TGAAAAATAT CAAACCTTGT ATTTATTAGC AGCAAGTTAT 
TTTTCTGAAA ACGGCTCGTA TTCAACTGCT GACTTTCTTG ATTATTTAGA TGAAAGTAGT 
TTACAAGGTA CTCTTGGGCA AATTGAAAAT TTAAATGTTG ACCAAGAAGT TGATATGCGG 
GCAATTGATG ATTGTATCCA TATGATCGCA GAACAAACAC CGTTAGCTGC GCAAATTGCA 
GATAAGCAAG CCCAGTTAAA AGAAGCTAAT TCACTGCATA ATACAGAATT AGCTACGCAA 
TTAACGATTG AACTGGTAAA ATTATTAAAG CAGCAGCAAC GCTTAAAAAC GGAGGAGACT 
AATTAA 

 

Protein sequence

MAKIPRNVID EIRNSVDIGD VIGRYVQLHQ AGKNLIGLCP FHDEKTPSFS VNEEKQFFYC 
FGCHRSGNVF QFLMELKHID FVDAVKEIAN DSNIKIPEQY VSVPAKPSNN ENRQLFDLHD 
KAAKLYHHIL VNTPAGQVAL NYLKKRGMSE ELIEQFGLGY APDQRILKPF FQQQKVDYQL 
LRKSGLFSED QQGELRDRFI ERIMYPIKNG QGQVIAFSGR LIDTSKTNLP KYLNSPETPI 
FNKRRTLFNF DVARKAARKD GRLYLFEGFM DVISAFAAGI ENGIASMGTS FTEEQVAIIG 
RATKQLDICY DGDQPGQNAI DRAISLVNDH RPNQLQVKVV QLPAGIDPDE YVQKYGPQQF 
NAYLTNKEET TTEFYLRFLR NGKNLDNQNE LMQYLNQALK VIAQVQAPLE EDMYLQRLAS 
EFNLDRQTLK TQLDQLRQQL GIHNQPWTKQ QPSLVRHQQF QQTSEEEHRK VKLSRTELAE 
QILLRYMLYD REVWMHVTSD HDFHFAHEKY QTLYLLAASY FSENGSYSTA DFLDYLDESS 
LQGTLGQIEN LNVDQEVDMR AIDDCIHMIA EQTPLAAQIA DKQAQLKEAN SLHNTELATQ 
LTIELVKLLK QQQRLKTEET N