Gene Lreu_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0726 
Symbol 
ID5189276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp795756 
End bp796499 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID640590559 
ProductABC transporter related 
Protein accessionYP_001271327 
Protein GI148543957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000170097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACTA AAATGATTGA AATTAAAAAC TTACAGAAAA AATTCAAAAA TAATATTGTC 
TTAAAAGATA TTTCCGAACA TGTTGATAAG GGCCAAGTAA TTTGTGTGAT CGGCCCTTCA
GGAGCAGGTA AAAGTACTTT TCTCCGTTGC TTAAATGCAC TCGAACAACC AACAAGCGGA
CAAGTTCTTT TTGAAGGACA GAATCTGATT GGCTTAAGTG ATAAAAAACT CGATCAGTTG
CGAGAAAAGA TGGGAATGGT TTTTCAAAGT TTCAATCTTT TTCCTAATAT GACAGTCCTT
AAAAATATCA CCATTGCACC AGTTAAAGTT AAAAATATCA ATGAAAAAGA AGCAGCTAAA
ACTGCGATGG AACTACTAGA AAAAGTTGGT TTAAGCGATA AAGCTCAACA ATATCCGGAT
CAACTGTCAG GAGGGCAAAA ACAACGGGTT GCCATTGCCC GGGCCCTTGA GATGAGTCCG
GAAGTAATGC TCTTTGACGA ACCAACTAGT GCCCTTGATC CCGAAATGGT TGATGAGGTA
CTAAAAGTAA TGCGCGATTT AGCTGAATCG GGAATGACAA TGGTGGTTGT TACCCATGAG
ATGGGGTTTG CTCGTGAAGT AGCAGACCAA ATCTGGTTTA TGGCAGATGG GTATATTCAG
GAAACTGGAG ATCCAGAAGA ATTTTTTGCC CACCCTACTA GCCCACGGGC ACAAGACTTT
TTGAAAAAGA TTTTGAAATC ATAA
 
Protein sequence
MPTKMIEIKN LQKKFKNNIV LKDISEHVDK GQVICVIGPS GAGKSTFLRC LNALEQPTSG 
QVLFEGQNLI GLSDKKLDQL REKMGMVFQS FNLFPNMTVL KNITIAPVKV KNINEKEAAK
TAMELLEKVG LSDKAQQYPD QLSGGQKQRV AIARALEMSP EVMLFDEPTS ALDPEMVDEV
LKVMRDLAES GMTMVVVTHE MGFAREVADQ IWFMADGYIQ ETGDPEEFFA HPTSPRAQDF
LKKILKS