Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0726 |
Symbol | |
ID | 5189276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 795756 |
End bp | 796499 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590559 |
Product | ABC transporter related |
Protein accession | YP_001271327 |
Protein GI | 148543957 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000170097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACTA AAATGATTGA AATTAAAAAC TTACAGAAAA AATTCAAAAA TAATATTGTC TTAAAAGATA TTTCCGAACA TGTTGATAAG GGCCAAGTAA TTTGTGTGAT CGGCCCTTCA GGAGCAGGTA AAAGTACTTT TCTCCGTTGC TTAAATGCAC TCGAACAACC AACAAGCGGA CAAGTTCTTT TTGAAGGACA GAATCTGATT GGCTTAAGTG ATAAAAAACT CGATCAGTTG CGAGAAAAGA TGGGAATGGT TTTTCAAAGT TTCAATCTTT TTCCTAATAT GACAGTCCTT AAAAATATCA CCATTGCACC AGTTAAAGTT AAAAATATCA ATGAAAAAGA AGCAGCTAAA ACTGCGATGG AACTACTAGA AAAAGTTGGT TTAAGCGATA AAGCTCAACA ATATCCGGAT CAACTGTCAG GAGGGCAAAA ACAACGGGTT GCCATTGCCC GGGCCCTTGA GATGAGTCCG GAAGTAATGC TCTTTGACGA ACCAACTAGT GCCCTTGATC CCGAAATGGT TGATGAGGTA CTAAAAGTAA TGCGCGATTT AGCTGAATCG GGAATGACAA TGGTGGTTGT TACCCATGAG ATGGGGTTTG CTCGTGAAGT AGCAGACCAA ATCTGGTTTA TGGCAGATGG GTATATTCAG GAAACTGGAG ATCCAGAAGA ATTTTTTGCC CACCCTACTA GCCCACGGGC ACAAGACTTT TTGAAAAAGA TTTTGAAATC ATAA
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Protein sequence | MPTKMIEIKN LQKKFKNNIV LKDISEHVDK GQVICVIGPS GAGKSTFLRC LNALEQPTSG QVLFEGQNLI GLSDKKLDQL REKMGMVFQS FNLFPNMTVL KNITIAPVKV KNINEKEAAK TAMELLEKVG LSDKAQQYPD QLSGGQKQRV AIARALEMSP EVMLFDEPTS ALDPEMVDEV LKVMRDLAES GMTMVVVTHE MGFAREVADQ IWFMADGYIQ ETGDPEEFFA HPTSPRAQDF LKKILKS
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