| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0701 |
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| Symbol | truB |
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| ID | 5188325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 768594 |
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| End bp | 769499 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640590535 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001271303 |
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| Protein GI | 148543933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0781617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGGAA TAATACCCTT ATATAAAGAA CGTGGGATGA CTAGTTTTGC CTGTGTTAGT
CGACTGCGAC AAATTTTAAA AACTAAAAAG ATTGGTCATT CAGGAACGCT TGACCCAGGT
GTAGCAGGCG TTTTACCAAT TTGTGTTGGA AATGCTACCA AAGTTGTTGA CTATTTGATG
CAATCAGGAA AGCAATATCA AGGTGAGCTT TTAATTGGGT TTGCGACTAC TACTCAAGAC
CTTGATGGAG ACAAAATTGA AGAAAAAGTA GTTGCAGATG AAATTCCCAC TAGTGAAATA
CTATCAGCCA TGAATTCATT AACGGGGACA ATAATACAAA TCCCACCGAT GTATTCGGCG
GTAAAAGTAA ATGGAAAAAA GCTTTATGAA TATGCAAGAG CTGGTGAAAC TGTTGAACGG
CCCAAACGGC AAGTGACTAT TAGCAAATTT GAATTACTAA GCTCAAAGTA TGATAAGAAA
AACAAACAAC AACGAATCCG CTTTAATGTT GAATGTAGTA AGGGTACTTA TATTCGGACA
CTTGTTGTTG ACCTTGCACG TAAACTAGGA TATCCAGGAG TAATGAGTTT GTTAACGCGG
TTGAAGAGTG GAGGCTTTAC TCTTGATCAG ACTCTAAGTT TAGATGACGT TCGCGATGCT
GTTGCGACCC AAACTCTCCA GCAATACTTG TATCCTTTAG ATTATGCTTT GAAGGACTAT
CCGCAATTAA CGATTCAAGT GGCTCAATGG AAAAAGGTTC AAAATGGGGG ATGGCTTTCT
CCAAGTGAAC TTAATACTAG CGAGAAGGAA ATTGTGTTAT CATTTGATGG ACAAGTAAAA
GCACTGTATC ATTTTGATCC GAAAAATAAA ATGTATAAGC CAACTAAAAT GTTTGCAGTT
AATTGA
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| Protein sequence | MDGIIPLYKE RGMTSFACVS RLRQILKTKK IGHSGTLDPG VAGVLPICVG NATKVVDYLM
QSGKQYQGEL LIGFATTTQD LDGDKIEEKV VADEIPTSEI LSAMNSLTGT IIQIPPMYSA
VKVNGKKLYE YARAGETVER PKRQVTISKF ELLSSKYDKK NKQQRIRFNV ECSKGTYIRT
LVVDLARKLG YPGVMSLLTR LKSGGFTLDQ TLSLDDVRDA VATQTLQQYL YPLDYALKDY
PQLTIQVAQW KKVQNGGWLS PSELNTSEKE IVLSFDGQVK ALYHFDPKNK MYKPTKMFAV
N
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