Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0673 |
Symbol | |
ID | 5188739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 740318 |
End bp | 740740 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640590506 |
Product | RinA family phage transcriptional regulator |
Protein accession | YP_001271275 |
Protein GI | 148543905 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01636] phage transcriptional activator, RinA family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.955298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAAAG AAGTAAAAAG TCTAGTAATA GTAATACTGA AAGATTATCC TTCAATTGAT AAGAAACTAA AGAGCCGTAA GTTTGAACTA ATGCACCCAC TCCACAAAAG AGATGAAAAT GTAGGCGGTG GACGTGCTAT TAATCGCCCG TGGACTTATT ACGATGATAT GTTAATAACC ATTGACCAAG ATAGATATAT GCACCGCTTA AAACGTGAGA AAGAAGCTAT TGACTTAGCA TTACAAGACG CTGGGGACTG TACCCAGAAG ATAATTAAAG AATGCTATTT TAACCCTAAT CATAAGACGA TAAAGAACCT AGTAGCAACT GGCGATATAT GGTGTAGCAC TACAAAAGCG TACAAGTTAC GTGATCAATT TATAGTAGAT GTTGCTAAAA AGTTAGACCT AGATGTGTTC TAA
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Protein sequence | MRKEVKSLVI VILKDYPSID KKLKSRKFEL MHPLHKRDEN VGGGRAINRP WTYYDDMLIT IDQDRYMHRL KREKEAIDLA LQDAGDCTQK IIKECYFNPN HKTIKNLVAT GDIWCSTTKA YKLRDQFIVD VAKKLDLDVF
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