Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0659 |
Symbol | |
ID | 5189558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 728173 |
End bp | 729102 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640590492 |
Product | ribonuclease Z |
Protein accession | YP_001271261 |
Protein GI | 148543891 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.089983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTTG AATTTTTAGG AACAGGCGCT GGTTCCCCAA GTAAGCAACG TAATGTAGCA AGTGTTGCAT TGCGGTTGTT AGAAGAACGA AACGCAATTT GGTTATTTGA TGTTGGAGAA GCTACTCAAC ATCAAATTCT CAATACGACA ATTAGGCCAC GAAAGATAGA AAAAATCTTT ATTACTCACT TGCATGGTGA TCATATCTTT GGTTTACCTG GTTTACTAAG TTCCCGCTCT TTTCAAGGAG GAACCGAACC ATTGACGATC TATGGACCAG TAGGAATAAA GCGGTATGTT CAGACTTCTT TGCAAGTAAG TGAGTCACGC CTCAGTTATC CTTTGCATTT TGTTGAAATA ACAGATGACG GGGAACTATT TAATGATCAT GGTTTTAGAG TGATTGCACG AAAGTTGGAT CACAAAATTG CTTGTTTTGG ATACCGGATT GAAGAAGCGG ATCATCCAGG AGAATTACAA GTTGAAAAAT TACGAGAACA AAAAGTACCA TCTGGGCCAA TTTACGGCCA ACTAAAAGCT GGAAAAACGG TTACTCTTCC TGATGGTCGC GTATTAGATG GTCATGACTT TATTGGCACT CCTCAACCTG GACGCATTAT TGCAATTTTA GGCGATACTA GACAAACAAA GAATGCAATT TTGTTAGCAC AAAATGCGGA TGTATTAGTG CATGAAAGTA CTTTTGCTAA AGATGAGACG AAGATGGCAC ACAATTATTA TCATTCAACC AGCAAACAAG CAGCTGAAAT TGCAAAAAAA GCTGGTGTTA AAAAATTATT GTTAAATCAT ATTTCAGCAC GATACACCGG TAAAGCAGCC TATCAATTGG CATATCAAGT TCGTAATATT ATTCCTGATA CTCGAGTTGT TAATGATTTT GACGTGATTG ATATTCCGTT TAAAAAATGA
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Protein sequence | MQLEFLGTGA GSPSKQRNVA SVALRLLEER NAIWLFDVGE ATQHQILNTT IRPRKIEKIF ITHLHGDHIF GLPGLLSSRS FQGGTEPLTI YGPVGIKRYV QTSLQVSESR LSYPLHFVEI TDDGELFNDH GFRVIARKLD HKIACFGYRI EEADHPGELQ VEKLREQKVP SGPIYGQLKA GKTVTLPDGR VLDGHDFIGT PQPGRIIAIL GDTRQTKNAI LLAQNADVLV HESTFAKDET KMAHNYYHST SKQAAEIAKK AGVKKLLLNH ISARYTGKAA YQLAYQVRNI IPDTRVVNDF DVIDIPFKK
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