Gene Lreu_0654 details

Gene Information

• Locus tag: Lreu_0654
• Symbol: engB
• ID: 5188812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 723732
• End bp: 724322
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640590487
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001271256
• Protein GI: 148543886
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.000108804
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTTC ACAATGTAGA TTTAACAATC AGTGCCGTAA GTGATGAACA ATATCCTAAA 
ACAAATATTC CAGAAATTGC TTTAGTTGGT CGTTCAAATG TTGGGAAGTC ATCGTTGACA 
AATGTCTTAA TCAACCGGCG CAATTTTGCT CATACGTCTA GTCAGCCAGG TAAAACCCAG 
ACGTTAAATT TCTATGACGT TGAGGATAAG GTATATTTTG TCGATGTTCC AGGATATGGG 
TATGCCAAAG TCTCGAAAAA AGAGCGAGAA CGATTTGGAA AAATGATCGA ACAATACTTA 
ACCCAACGTG AACAATTACG CGGAGTTATT CAATTAGTTG ATGCACGGCA TGAACCAACC 
CCTGATGATG TAAATATGTA TAATTGGTTA CAATATTATA ATATTCCAAC ATTAATCGTA 
GGGACAAAGA TTGATAAGGT AAAACGAAGT GCATGGAATC GCCAACTAAG CCTTATCAAA 
AAGACCCTTG ATGTTGAGAG TTCAACACCG ATTATTCTAT TTTCAGCTAC AGAGAAAAAG 
GGTAAAGATG ATGTTTGGCA GTGGATTGAA GAGCGAATGG GGAAGAACTA A 

 

Protein sequence

MEVHNVDLTI SAVSDEQYPK TNIPEIALVG RSNVGKSSLT NVLINRRNFA HTSSQPGKTQ 
TLNFYDVEDK VYFVDVPGYG YAKVSKKERE RFGKMIEQYL TQREQLRGVI QLVDARHEPT 
PDDVNMYNWL QYYNIPTLIV GTKIDKVKRS AWNRQLSLIK KTLDVESSTP IILFSATEKK 
GKDDVWQWIE ERMGKN