| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0648 |
|---|
| Symbol | rpsO |
|---|
| ID | 5188331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 716160 |
|---|
| End bp | 716429 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640590481 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_001271250 |
|---|
| Protein GI | 148543880 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000459061 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTT CAAAAGAACG TAAAGATCAA ATTATTAAGG AATTCGCAAC TCACGAAGGA
GACACTGGTT CTACTCAAGT TCAAGTTGCT GTTTTAACTG CTGACATCAA CGAATTGAAC
GATCACCTTC GTACACACAA GCACGATTAC CATTCACAAC GTGGTTTAAT GAAGAAGATT
GGTCACCGTC GTAACTTATT AGCTTACTTA CGTCGGACTG ATTTACCTGC TTACCGTGAA
CTTATCCAAA AGTTAGGTTT ACGTCGGTAA
|
|---|
| Protein sequence | MAISKERKDQ IIKEFATHEG DTGSTQVQVA VLTADINELN DHLRTHKHDY HSQRGLMKKI
GHRRNLLAYL RRTDLPAYRE LIQKLGLRR
|
|---|
| |