Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0627 |
Symbol | |
ID | 5189859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 696461 |
End bp | 697408 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590460 |
Product | diacylglycerol kinase, catalytic region |
Protein accession | YP_001271229 |
Protein GI | 148543859 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000117369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTATT CAATCATCCT CAACCGTCAT GCTGGTAATG GCAATGCAGA AAAGGCATGG TCGTCAATCA AACCGGTCTT AGATCAACAA CAAATTGATT ATCACATGGA AACAACTAAG TATCCTAATC ATGGAGAATA CCTTGCCAGT CAAATCGCTC AATCCCATAA TGCGGGATCA ACAATTGTCA TTGCGATTGG TGGTGACGGT ACGCTACATC AAGTTGTTAA TGGACTTATG AAGACGGCCA AGCGATTGAA TAAAGAACCA CTTGCGGTTG GATATATTCC TGCCGGGACA GGAAATGATT TTGCCCGCGG TTACGGGATT TCTATGCATC CACAAAGGGC ATTAAATCAA ATTTTAACTG CAGACGCACC ACAAAAAATT AACATTGGTC ATTATCATGA GGCGATTCGG GGTGAAGAAG GCTATTTTCT TAATAATTTA GGAATTGGTT TTGACGCGGC AATTGTTAGT CGTGCTAATA CATTCAAGGC TCATCACAAG AAAAATCATA TCGGGCGTTT CACCTATCTT CAAAAGGCAA TTGGAGTAAT CTATGATCAA GAGCCCTTTA CCTTGATGAT TCAATCTGGG CGTGAACGCT TTATTTTTCC TAAAGCTTAC ATCGCAATTA CCAGCAATCA TCCATTTATC GGTGGCGGAT TTAAGGTCGC ACCAAATGCT TCATTAAAGA AACCATCATT GGAATTAGTC GTTGCTGAAC GAAAAGGTTG GCCTATGACA ATTTGGCAAT TGCTACAGTT AGCCCGGGGT AAGTTAGACC AATCAAAATT TGCCCACCAC TTCCAAAGCG ATAATCTCCA CATCACAACT ACTTCACTAG AATTTAGTCA AACTGATGGA GAAGAGATTG GTAATCGTTT TATCGACCTC ACCTTAGACA TTAGTCAATA TCCAATTTGG CAAACAATAG AAAAATAA
|
Protein sequence | MNYSIILNRH AGNGNAEKAW SSIKPVLDQQ QIDYHMETTK YPNHGEYLAS QIAQSHNAGS TIVIAIGGDG TLHQVVNGLM KTAKRLNKEP LAVGYIPAGT GNDFARGYGI SMHPQRALNQ ILTADAPQKI NIGHYHEAIR GEEGYFLNNL GIGFDAAIVS RANTFKAHHK KNHIGRFTYL QKAIGVIYDQ EPFTLMIQSG RERFIFPKAY IAITSNHPFI GGGFKVAPNA SLKKPSLELV VAERKGWPMT IWQLLQLARG KLDQSKFAHH FQSDNLHITT TSLEFSQTDG EEIGNRFIDL TLDISQYPIW QTIEK
|
| |