Gene Lreu_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0625 
Symbol 
ID5189076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp694632 
End bp696032 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content43% 
IMG OID640590458 
ProductNLP/P60 protein 
Protein accessionYP_001271227 
Protein GI148543857 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00171515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA AAAGAACACA TCATTCAAAT AACCATCGAT CTCGTGGCGT TTTTGCAGGA 
GCAGTTAGTG CCTTAAGTTT ATTAGCAGTA ACAACACAAG CAGTTAATGC TGAACAGCTT
ACTGTTAAGT CTGGTGACAC TATTTGGGGG CTTGCAAAAC AACATGGACT TTCTGTTAGT
GCATTAGAAC AAGCAAATCC TTCAGTTAAG AAGATAAACG ATAGCATCGA CTTAATTACG
GTTGGTCAAC AATTAACGTT GCCTACTGCT CAACATGATG CTAGCGCTGA TTTGAATGCT
GATGGTAGTT ATACTGTTAA GCCTGGCGAC ACGCTTAGCT CTATTGCTGA TCGTTATAAT
GTAACGGTTA GTCAATTAAT GGCATGGAAT AACCTAAGCA CTAATGACTC ATTATACATT
GGACAACAAC TCAGTGTAAC AGATCCTGCG ATCTCAACTG CTGTAAACGC ACCCGCTGTA
AGTGCTCCTG TTGCTCAATC GACAGATGCA ACTTCATCGG TTCAGGTTCA AACTTCAGCA
GTTGCCTCTG CTTCTGTGCC TCAACGAGAT GTGGCTAGTA GCCAACCAGC AGGAACTGTT
CCTAGTCAAA GTGCTGCCAA TAGCAACGCA ACTCTTGCAA ATAACACAGC TACGGTTGCG
ACTGGCTCCT CAGCTGCTAA TAGCGTAGCA ACTGCAACAG ATGCTGCTCA AACTACTACA
GCTAATACTG CTTCTACCTC AGCTGAAAAT AGTGTTGCAC CACAAACGCA AAACGTTGCG
GTTAGTCAGG CTGCTTCAAC AGCTGTAAAT ACGACTGCTT TATATGGACA ATCATTTGTT
CAAGCAGCAC CAGTAGCAAG TCAAGCTCCA CAATCACAGA CTGCTCCAGC ATCACAAGCA
ACGGTTAACG TTCAGAACAG TAATGCTGCT GCTTCACAAC AAACAACTGC TGTAACATCA
CAAACTCAAC CGCAACAATC ACAAGCGGCT GCTAGTCAAC CTGCACAGCA AGCAGCAACT
ACTAATCAAG ATTTACAACA TGGTTCTGTA GTTAGTCTTG CCACTAAGAT CGCCAACTCT
AATAGTGTTC CGTACGTATG GGGTGGTGAA AGCCTTAGTG GAATGGATTG TTCTGGATTA
GTTAAGTATG TTTATGCTAA TGCGGAAGGT AAGCAATTAC CACACTATAC GGGAGCCCTT
GAAAACTGTG TGGACCAACA TCCAGTTAGT GAAGCTAAGC CAGGTGATCT TTTGTTCTGG
GGTAACCATG GTTCAACTTA CCATACAGCT ATTTATACAG GAAATAATCA ATATGTAGCA
GCTGCTCACC CTGGAACTAA TGTATCGACT TACACGATTA GTTCATACTT TAATCCAAGT
TTTGCCGGAA CAGTTAAATA G
 
Protein sequence
MSKKRTHHSN NHRSRGVFAG AVSALSLLAV TTQAVNAEQL TVKSGDTIWG LAKQHGLSVS 
ALEQANPSVK KINDSIDLIT VGQQLTLPTA QHDASADLNA DGSYTVKPGD TLSSIADRYN
VTVSQLMAWN NLSTNDSLYI GQQLSVTDPA ISTAVNAPAV SAPVAQSTDA TSSVQVQTSA
VASASVPQRD VASSQPAGTV PSQSAANSNA TLANNTATVA TGSSAANSVA TATDAAQTTT
ANTASTSAEN SVAPQTQNVA VSQAASTAVN TTALYGQSFV QAAPVASQAP QSQTAPASQA
TVNVQNSNAA ASQQTTAVTS QTQPQQSQAA ASQPAQQAAT TNQDLQHGSV VSLATKIANS
NSVPYVWGGE SLSGMDCSGL VKYVYANAEG KQLPHYTGAL ENCVDQHPVS EAKPGDLLFW
GNHGSTYHTA IYTGNNQYVA AAHPGTNVST YTISSYFNPS FAGTVK