| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0615 |
|---|
| Symbol | |
|---|
| ID | 5189395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 685681 |
|---|
| End bp | 686604 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640590450 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001271219 |
|---|
| Protein GI | 148543849 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAT TACAAAATGC AGACTTAATG ACGGCAATTG TAACCCCCTT TGATGACGAG
GAAAATATTG ATTATGGTCG TTTAGAATAT TTGACAAATT ACTTAATTGA ACATGGGAGC
AACGGTTTTG TTATCGGGGG GACTACTGGG GAAACTCCAG AACTCACTCA TGATGAAAAA
ATTGAGCTAT ACCAACATTT CGGTGAAATT GTAAACGGAC GGGTTCCGGT TATTGCTGGA
ACTGGAAGCA ATAATACTAA GGAAACGATT GCCTTTACTA ATGAGGTTGC GCAAATTAAC
GGTATCGATT ATGCCCTTGT TGTTGTTCCT CCTTATAACA AACCTAACCA ACGGGGAATG
GTTGCTCATT TCACAGCAGT TGCGGATAGT GTTGACCTCC CAATCATCAT TTACAACATT
CCTGGTCGTA CAGGGGTAAA GATGGCTCAG GAAACCGTAG TAGAATTGTC TCACCATCAA
AATATCGCCG CTGTAAAACA ATGTACATCT TTGGAAGAAC TTGAATACAT TGTTGAACAC
CGCGACCCTG ATTTTGCAGT TTTCACAGGT GAAGATGCAC AGGCGCTAAC TGCCCGGGTT
TTAGGAGCAA ATGGGGTTAT CTCGGTTGCT TCCCATACTT ATGTCGATCA AATGCGCCAA
ATGTATGACT CACTATACCG AGGCGATTAT CAAACTGCTG GTAAGTTGCA ACGGTGGCTA
ACTCCCCGGA TGGCCGCTTT GTTTATGTTC CCATCACCAT CACCAGTTAA AGCAGTTTTG
AATGCGCAAG GTTTTAACGT TGGTAGTTGT CGATTACCAA TTCTTCCATT AAATGAAGAA
GAAAAACGCA AATTAGAGAC TGCCTTATCA TTACCTACTA ATTCGTTGAC TGCCAAGAAC
TTACCTTTAA ATTTGGGGGA ATAA
|
|---|
| Protein sequence | MTLLQNADLM TAIVTPFDDE ENIDYGRLEY LTNYLIEHGS NGFVIGGTTG ETPELTHDEK
IELYQHFGEI VNGRVPVIAG TGSNNTKETI AFTNEVAQIN GIDYALVVVP PYNKPNQRGM
VAHFTAVADS VDLPIIIYNI PGRTGVKMAQ ETVVELSHHQ NIAAVKQCTS LEELEYIVEH
RDPDFAVFTG EDAQALTARV LGANGVISVA SHTYVDQMRQ MYDSLYRGDY QTAGKLQRWL
TPRMAALFMF PSPSPVKAVL NAQGFNVGSC RLPILPLNEE EKRKLETALS LPTNSLTAKN
LPLNLGE
|
|---|
| |