Gene Lreu_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0608 
Symbol 
ID5189213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp675997 
End bp678474 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content40% 
IMG OID640590443 
ProductATP-dependent RecD/TraA family DNA helicase 
Protein accessionYP_001271212 
Protein GI148543842 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG AAATCGACCT ATTTAAGACG CCAACGGAGC CGTCTTTTTT TATTGGTCAG 
GTACAATCTG AGATTTTTAC TAGTCCAGAT TCGTTTTTTA AGGTTTTAAT TGTCTCGGTT
GAAGAAGCAA ATTTTGATTG GCACGAGCCG GAGATTACTG TAACGGGAAG TTTTGGTGAT
CTTAGTGATG ATCAGACTTA CCGCTTTGAG GGAAAAATTG TTGAGCATCC GCGATATGGG
CAACAGTTTC AAGCGACTTC TTACCATGTC AATCGGCCCA CAAGCAAGGA TGGGTTAATT
GATTTCTTGT CTGGAAAACA GTTTACCGGA ATTGGAAAAA AGACGGCTGA AAAAATTGTC
GATAAATTAG GAACGGATGC GATTAATAAA ATTATTGCTG ACCCCCATGT TTTAGATGAA
TTAAAACTCC GCAAAGCAGT TAAGGATTCA TTAGTTGATA ATTTACGAGC ACACCAGGGG
ATGGACCAGA TTATTATCGG CCTAAATGAT CTCGGCTTTG GCGCTAACCT TAGTAGTGCA
ATTTTTGACA AGTACGGAGA AGAAACTCTG CATATTATTA ATGAAAATCC TTACCAACTC
GCTGCTGAGA TAGATGGAAT TAGCTTTAAT CGGGCTGATC AGGTGGCACA GAAATTAGGA
ATCGCCACGG ATGATTCACG TCGAATTGAT GCCGCAATTA TCCAGACGCT TGATGACTTG
ACAATGGAGA CTGGTGATAC ATTTACTACA ACAAAACCTC TTCTGCAGCA AACTATCCAG
TTGCTTGCCC AAGGAAGTGG GGGTCGTGTT TCGACCGATT TAATTGCCAA CCAAATTGTT
GAGCTAGAGA AAAATCAAGC AATTAGTTAT GCGGATGAAA AAATTTATCC AACTGCCCTT
TATAACGCGG AATGGCAAAT TGCTGATCAC TTACATCGTC TTCTTACCGT TGACCAGGAA
AAAGTACCAG CAACGACTAT TGAGAAAACA GTTACGAAGG TTGCCGATCA ATCGGGGATA
ACCTATGACC AAGTTCAAAA AGAGGCCATC AAAACAGCCT TAAATAGTAA AGTTATGCTT
CTTACGGGAG GCCCAGGAAC GGGAAAAACA ACAATTATTA AAGGGATTGT AGCAAGTTAT
GCGAAAATTC ATGATCTTTC ATTGGACGTA AATGAATATA AAGAAAAGTC ATTTCCTGTT
TTACTAGCTG CTCCTACAGG CCGTGCTGCT AAACGAATGA GTGAAGCTAC TGATTTACCA
GCAAGTACAA TTCACCGCTT GCTAGGGCTT AATGGCCGGG AAATGCCAAC TGATATGAAT
GCCCGCGATT TAGAAGGCTC GTTATTGATT ATTGATGAAA TGTCGATGGT CGATACCCTC
TTGTTTAAGA CTCTTATTCA AGCCGTCCCT ACTTCTATGC ATGTAGTTTT GGTAGGTGAT
AAAGACCAAT TACCATCTGT TGGTCCCGGG CAAGTTTTCC ATGATCTTCT TGACTTTGCA
GAACTGCCCA AAGTTGAACT GACCAATATT CACCGCCAGG CTGCTGATTC AACAATTATC
CCATTAGCTC ATGCTATCAA AGAGGGTAAG CTACCATCAG ATCTAACGAA TAAAATGCCA
GATCGATCAT TTATCTCATG CCATGCTAAC CAAGTGCCAA GTGTGGTTCA ACAAATTATT
GACCTTTCTA AAAAACGAGA TTATTCCGCA AATGATATTC AAATCTTGGC ACCAATGTAC
CGTGGACAGG CAGGGATCGA TCGTTTGAAT GAGCTTGCAC AACAGGCGTA TAATCCTCCA
GCTAATGGAA AGCAAGAAGT CGATTTTAGG GGACTAACTT TTCGTGTTGG AGATAAGGTT
CTGCAACTCG TTAATGTTCC AGAAAAGAAC ATTTTTAATG GTGACATTGG AAAAATCACA
GCAATTGAAA GCGGTAGGAC AGTCGGTAAG AAAAATGAAT CAATTACTGT CGATTTTGAT
GGTAATGAAG TGAGTTATAG CCGCATGGAA TGGAATCAAT TACGGTTAGC TTATTGTATT
TCGATCCATA AAGCACAGGG AAGTCAGTTT AAGATGGTTC TTTTGCCAAT TGTTCAGCAG
TTTAGCCGGA TGCTTCAACG AAATCTTTTA TATACAGCGA TTACTCGTGC CGCAGAAAAG
CTAGTTTTGA TCGGTGAGCC ATATGCGGCT GTGACTAGTG TAAAAAATGA AGCAGTTAAC
CGAAAAACTT CTTTGGTTGA TCGCCTCGGT AGGGTTTGGA ATAGGCATGG TGAACTAAAA
TCAAACTTAG ATCATCAAAC AGATTCATTA ACAAAAGAAC TTGCTAGTTC CCAACCAGTT
CAAAAACAAA CTGAACAATT AATAAATAAT GATGCTCAGC AATATATTCT AACAGCTGAT
CTCATTAATT CAGATACAAT TGATCCATTA ATCGGAATGG AAAATATTAG CTTACAAAGT
TTGCATCAAG TCAAATAA
 
Protein sequence
MAEEIDLFKT PTEPSFFIGQ VQSEIFTSPD SFFKVLIVSV EEANFDWHEP EITVTGSFGD 
LSDDQTYRFE GKIVEHPRYG QQFQATSYHV NRPTSKDGLI DFLSGKQFTG IGKKTAEKIV
DKLGTDAINK IIADPHVLDE LKLRKAVKDS LVDNLRAHQG MDQIIIGLND LGFGANLSSA
IFDKYGEETL HIINENPYQL AAEIDGISFN RADQVAQKLG IATDDSRRID AAIIQTLDDL
TMETGDTFTT TKPLLQQTIQ LLAQGSGGRV STDLIANQIV ELEKNQAISY ADEKIYPTAL
YNAEWQIADH LHRLLTVDQE KVPATTIEKT VTKVADQSGI TYDQVQKEAI KTALNSKVML
LTGGPGTGKT TIIKGIVASY AKIHDLSLDV NEYKEKSFPV LLAAPTGRAA KRMSEATDLP
ASTIHRLLGL NGREMPTDMN ARDLEGSLLI IDEMSMVDTL LFKTLIQAVP TSMHVVLVGD
KDQLPSVGPG QVFHDLLDFA ELPKVELTNI HRQAADSTII PLAHAIKEGK LPSDLTNKMP
DRSFISCHAN QVPSVVQQII DLSKKRDYSA NDIQILAPMY RGQAGIDRLN ELAQQAYNPP
ANGKQEVDFR GLTFRVGDKV LQLVNVPEKN IFNGDIGKIT AIESGRTVGK KNESITVDFD
GNEVSYSRME WNQLRLAYCI SIHKAQGSQF KMVLLPIVQQ FSRMLQRNLL YTAITRAAEK
LVLIGEPYAA VTSVKNEAVN RKTSLVDRLG RVWNRHGELK SNLDHQTDSL TKELASSQPV
QKQTEQLINN DAQQYILTAD LINSDTIDPL IGMENISLQS LHQVK