Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0608 |
Symbol | |
ID | 5189213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 675997 |
End bp | 678474 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590443 |
Product | ATP-dependent RecD/TraA family DNA helicase |
Protein accession | YP_001271212 |
Protein GI | 148543842 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG AAATCGACCT ATTTAAGACG CCAACGGAGC CGTCTTTTTT TATTGGTCAG GTACAATCTG AGATTTTTAC TAGTCCAGAT TCGTTTTTTA AGGTTTTAAT TGTCTCGGTT GAAGAAGCAA ATTTTGATTG GCACGAGCCG GAGATTACTG TAACGGGAAG TTTTGGTGAT CTTAGTGATG ATCAGACTTA CCGCTTTGAG GGAAAAATTG TTGAGCATCC GCGATATGGG CAACAGTTTC AAGCGACTTC TTACCATGTC AATCGGCCCA CAAGCAAGGA TGGGTTAATT GATTTCTTGT CTGGAAAACA GTTTACCGGA ATTGGAAAAA AGACGGCTGA AAAAATTGTC GATAAATTAG GAACGGATGC GATTAATAAA ATTATTGCTG ACCCCCATGT TTTAGATGAA TTAAAACTCC GCAAAGCAGT TAAGGATTCA TTAGTTGATA ATTTACGAGC ACACCAGGGG ATGGACCAGA TTATTATCGG CCTAAATGAT CTCGGCTTTG GCGCTAACCT TAGTAGTGCA ATTTTTGACA AGTACGGAGA AGAAACTCTG CATATTATTA ATGAAAATCC TTACCAACTC GCTGCTGAGA TAGATGGAAT TAGCTTTAAT CGGGCTGATC AGGTGGCACA GAAATTAGGA ATCGCCACGG ATGATTCACG TCGAATTGAT GCCGCAATTA TCCAGACGCT TGATGACTTG ACAATGGAGA CTGGTGATAC ATTTACTACA ACAAAACCTC TTCTGCAGCA AACTATCCAG TTGCTTGCCC AAGGAAGTGG GGGTCGTGTT TCGACCGATT TAATTGCCAA CCAAATTGTT GAGCTAGAGA AAAATCAAGC AATTAGTTAT GCGGATGAAA AAATTTATCC AACTGCCCTT TATAACGCGG AATGGCAAAT TGCTGATCAC TTACATCGTC TTCTTACCGT TGACCAGGAA AAAGTACCAG CAACGACTAT TGAGAAAACA GTTACGAAGG TTGCCGATCA ATCGGGGATA ACCTATGACC AAGTTCAAAA AGAGGCCATC AAAACAGCCT TAAATAGTAA AGTTATGCTT CTTACGGGAG GCCCAGGAAC GGGAAAAACA ACAATTATTA AAGGGATTGT AGCAAGTTAT GCGAAAATTC ATGATCTTTC ATTGGACGTA AATGAATATA AAGAAAAGTC ATTTCCTGTT TTACTAGCTG CTCCTACAGG CCGTGCTGCT AAACGAATGA GTGAAGCTAC TGATTTACCA GCAAGTACAA TTCACCGCTT GCTAGGGCTT AATGGCCGGG AAATGCCAAC TGATATGAAT GCCCGCGATT TAGAAGGCTC GTTATTGATT ATTGATGAAA TGTCGATGGT CGATACCCTC TTGTTTAAGA CTCTTATTCA AGCCGTCCCT ACTTCTATGC ATGTAGTTTT GGTAGGTGAT AAAGACCAAT TACCATCTGT TGGTCCCGGG CAAGTTTTCC ATGATCTTCT TGACTTTGCA GAACTGCCCA AAGTTGAACT GACCAATATT CACCGCCAGG CTGCTGATTC AACAATTATC CCATTAGCTC ATGCTATCAA AGAGGGTAAG CTACCATCAG ATCTAACGAA TAAAATGCCA GATCGATCAT TTATCTCATG CCATGCTAAC CAAGTGCCAA GTGTGGTTCA ACAAATTATT GACCTTTCTA AAAAACGAGA TTATTCCGCA AATGATATTC AAATCTTGGC ACCAATGTAC CGTGGACAGG CAGGGATCGA TCGTTTGAAT GAGCTTGCAC AACAGGCGTA TAATCCTCCA GCTAATGGAA AGCAAGAAGT CGATTTTAGG GGACTAACTT TTCGTGTTGG AGATAAGGTT CTGCAACTCG TTAATGTTCC AGAAAAGAAC ATTTTTAATG GTGACATTGG AAAAATCACA GCAATTGAAA GCGGTAGGAC AGTCGGTAAG AAAAATGAAT CAATTACTGT CGATTTTGAT GGTAATGAAG TGAGTTATAG CCGCATGGAA TGGAATCAAT TACGGTTAGC TTATTGTATT TCGATCCATA AAGCACAGGG AAGTCAGTTT AAGATGGTTC TTTTGCCAAT TGTTCAGCAG TTTAGCCGGA TGCTTCAACG AAATCTTTTA TATACAGCGA TTACTCGTGC CGCAGAAAAG CTAGTTTTGA TCGGTGAGCC ATATGCGGCT GTGACTAGTG TAAAAAATGA AGCAGTTAAC CGAAAAACTT CTTTGGTTGA TCGCCTCGGT AGGGTTTGGA ATAGGCATGG TGAACTAAAA TCAAACTTAG ATCATCAAAC AGATTCATTA ACAAAAGAAC TTGCTAGTTC CCAACCAGTT CAAAAACAAA CTGAACAATT AATAAATAAT GATGCTCAGC AATATATTCT AACAGCTGAT CTCATTAATT CAGATACAAT TGATCCATTA ATCGGAATGG AAAATATTAG CTTACAAAGT TTGCATCAAG TCAAATAA
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Protein sequence | MAEEIDLFKT PTEPSFFIGQ VQSEIFTSPD SFFKVLIVSV EEANFDWHEP EITVTGSFGD LSDDQTYRFE GKIVEHPRYG QQFQATSYHV NRPTSKDGLI DFLSGKQFTG IGKKTAEKIV DKLGTDAINK IIADPHVLDE LKLRKAVKDS LVDNLRAHQG MDQIIIGLND LGFGANLSSA IFDKYGEETL HIINENPYQL AAEIDGISFN RADQVAQKLG IATDDSRRID AAIIQTLDDL TMETGDTFTT TKPLLQQTIQ LLAQGSGGRV STDLIANQIV ELEKNQAISY ADEKIYPTAL YNAEWQIADH LHRLLTVDQE KVPATTIEKT VTKVADQSGI TYDQVQKEAI KTALNSKVML LTGGPGTGKT TIIKGIVASY AKIHDLSLDV NEYKEKSFPV LLAAPTGRAA KRMSEATDLP ASTIHRLLGL NGREMPTDMN ARDLEGSLLI IDEMSMVDTL LFKTLIQAVP TSMHVVLVGD KDQLPSVGPG QVFHDLLDFA ELPKVELTNI HRQAADSTII PLAHAIKEGK LPSDLTNKMP DRSFISCHAN QVPSVVQQII DLSKKRDYSA NDIQILAPMY RGQAGIDRLN ELAQQAYNPP ANGKQEVDFR GLTFRVGDKV LQLVNVPEKN IFNGDIGKIT AIESGRTVGK KNESITVDFD GNEVSYSRME WNQLRLAYCI SIHKAQGSQF KMVLLPIVQQ FSRMLQRNLL YTAITRAAEK LVLIGEPYAA VTSVKNEAVN RKTSLVDRLG RVWNRHGELK SNLDHQTDSL TKELASSQPV QKQTEQLINN DAQQYILTAD LINSDTIDPL IGMENISLQS LHQVK
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