| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0605 |
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| Symbol | mnmA |
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| ID | 5189784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 673353 |
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| End bp | 674486 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590440 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001271209 |
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| Protein GI | 148543839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA ATAGTCATAC ACGTGTGGTA GTAGGAATGA GTGGAGGAGT CGACTCTTCA
GTGACGGCTC TTCTCTTAAA GCGCCAAGGA TACGATGTTG TTGGTGTCTT CATGAAAAAC
TGGGATGACA CTGATGAAAA TGGTGTTTGT ACTGCCACTG AAGACTACAA AGATGTAGCA
AAAGTTGCTT CTAAGATTGG GATTCCATAC TATTCTGTTA ACTTTGAGAA GGAATACTGG
GATCGGGTTT TCAAGTATTT CATTGCTGAA TACAAGAAAG GTCGTACACC AAATCCTGAT
GTTATTTGTA ATAAAGAGAT CAAGTTCAAG GCTTTTATTG AATATGCTAA CCAATTAGGT
GCTGATTACG TTGCTACTGG GCACTATGCT GATGTAAAGC GTGATGAGAA CGGCCGGATG
CACTTGATGC GTGCTAAAGA CCAACACAAG GATCAAACTT ACTTCTTAAG TCAACTTGAT
TACAAGCAGT TGGATAAGGT AATGTTTCCA TTAGCTGGCT ACACTAAGCC AGAAATTAGA
AAGATTGCTG AAGAAGCAGG GCTTGCTACT GCTGATAAGA AGGATTCTGT TGGGATTTGC
TTTATCGGTG AGGATGGTCA TTTTCGTGAA TTCTTGAGTC AATATATTCC AGCACAACCG
GGAAATATGG AAACCCTTGA TGGCAAAGTT GTTGGTCAGC ATATGGGCTT AATGTATTAC
ACCATCGGTC AACGTCGTGG GCTTGGCCTT GGTGGTAATA AGGAAAGTAA TGAGCCATGG
TTTGTAATCG GTAAGGATAT GAAGAAGAAC GTTCTTTATG TTGGTCAAGG ATACGAAAAC
AGCCATCTTT ATGCTACTCA TCTTGAAGCG AGTGATATTC ACTGGGTTGA TGATGTTGTA
AGTCGTTATG GGCGTGATTT TCATTGTACG GCCAAGTTCC GCTACCGTCA GACAGATGTT
GGCGTTACTG TTCATTTGTC AGATGATGAT CAAATGGTAA CAGTTGAATT TGATGATCCT
GCACGGGCCA TCACTCCAGG TCAAGCAGTT GTCTTTTACG ATGGAGAGGA ATGCCTTGGG
AGTGCGATTA TTGATCGTGC TTACAGTCAT GACCGGCAGC TTCAATACGT TTAA
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| Protein sequence | MADNSHTRVV VGMSGGVDSS VTALLLKRQG YDVVGVFMKN WDDTDENGVC TATEDYKDVA
KVASKIGIPY YSVNFEKEYW DRVFKYFIAE YKKGRTPNPD VICNKEIKFK AFIEYANQLG
ADYVATGHYA DVKRDENGRM HLMRAKDQHK DQTYFLSQLD YKQLDKVMFP LAGYTKPEIR
KIAEEAGLAT ADKKDSVGIC FIGEDGHFRE FLSQYIPAQP GNMETLDGKV VGQHMGLMYY
TIGQRRGLGL GGNKESNEPW FVIGKDMKKN VLYVGQGYEN SHLYATHLEA SDIHWVDDVV
SRYGRDFHCT AKFRYRQTDV GVTVHLSDDD QMVTVEFDDP ARAITPGQAV VFYDGEECLG
SAIIDRAYSH DRQLQYV
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