| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0589 |
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| Symbol | murD |
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| ID | 5189943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 658331 |
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| End bp | 659701 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640590424 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001271193 |
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| Protein GI | 148543823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTGATGAATA TCAAGGTAAA AAAGTTCTTG TAATGGGTTT CGGAATTAGC
GGAATTAATG CAGCCCACTT ATTGGTAAAA CTTGGTGCAA ATGTTACCGC TAATGATAAA
GCAACTCCTA AAAATAATGA TATTGTTGAT GATTTAGAAG CTGATGGAAT CAAGGTAATT
ACTGGTGATA ATCCCATTTC ATTAGCTAAT GAAGGTTTCG ATGTTGTAGT AAAAAATCCT
GGAATTCCTT ATGATAATCC ATTAGTGGCT GCATTTGTTA AGCAAGGGAC ACCCATTATT
ACGGAAGCAG AACTAGGATG GCAAATTTTT GATGGTCACC TTGTAAGTGT AACCGGAAGT
AATGGGAAGA CTACCACAAC GACTTTAACT CAACTAATGA TTGCTGAAAA TGCAAAACAT
CAAGTAAAAT ATGCAGGTAA TATTGGAATT TCCTTTAGTA AAATTGCTGA GGATTTAGGA
CCAGACGACA CATTGGTCAC AGAATTATCT AGTTTCCAAT TATTAGGAGC ACCGACAATT
CATCCGCATA TTGCAATTAT TACTAACATT TTTTCTAACC ATTTAGACTA TCATAAGACA
CGAGAAAACT ATATTAATGC AAAGCTTAAT ATTACCCGGA ACCAAACCAA GGATGATTTC
TTAGTTATTA ACTGGGATCG TGATGAATGG CAGAAGATTG CCCAGCGTAG TCAAGCTACC
ATTGTGCCAT TTTCTCGTCT TAATAAGAGT CATGAAGGAT CTTATGTAGA AGATGGAATG
ATTTACTGGC GTGGGCAAGA AGTTATGCCA ACCAAGGATA TTCGATTGAT CGGTCCCCAA
AATGTAGAAA ATGCGTTGGC AGCAATTGCA GCGGCAAAAT TAAGTGGTGT TACAAATGAT
GCAATAAAGA AAGTTTTAAC AACATTTAGT GGAGTCCGTC ACCGCTTACA ATATGTGATG
GAATACCAAG AACGGCTTTT CTACAATGAT TCAAAATCAA CAGATATTGA AGCCACGGAG
GTTGCCTTAC AAGGTTTTGA TCGTCCAGTA ATTCTTTTGG CAGGTGGCCT TGATCGTGGT
TATACCTTTG AACGGTTGGT TCCTTACTTT AAGAAGCACG TCAAGGCAAT GATTGTTTTT
GGTGAATGTA AAGATAAAAT GAAGGATGCG GGAAATCAAG CTGGGGTTCC AGTAGTTGAA
AGTGAAAATG CAATTACTGC GGTACCAGAA GCATGGAAGT TGAGTGAACC AGGAGATGTC
ATTCTCCTCT CGCCTGCTAA TGCTAGTTGG GACCAATTCC CGAGCTTTGA AGTTCGTGGT
GATAAATTTA TTGAAGCAGT TGAAGAATTA ACAGGAAAGA AGGAACAGTA A
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| Protein sequence | MKKIDEYQGK KVLVMGFGIS GINAAHLLVK LGANVTANDK ATPKNNDIVD DLEADGIKVI
TGDNPISLAN EGFDVVVKNP GIPYDNPLVA AFVKQGTPII TEAELGWQIF DGHLVSVTGS
NGKTTTTTLT QLMIAENAKH QVKYAGNIGI SFSKIAEDLG PDDTLVTELS SFQLLGAPTI
HPHIAIITNI FSNHLDYHKT RENYINAKLN ITRNQTKDDF LVINWDRDEW QKIAQRSQAT
IVPFSRLNKS HEGSYVEDGM IYWRGQEVMP TKDIRLIGPQ NVENALAAIA AAKLSGVTND
AIKKVLTTFS GVRHRLQYVM EYQERLFYND SKSTDIEATE VALQGFDRPV ILLAGGLDRG
YTFERLVPYF KKHVKAMIVF GECKDKMKDA GNQAGVPVVE SENAITAVPE AWKLSEPGDV
ILLSPANASW DQFPSFEVRG DKFIEAVEEL TGKKEQ
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