Gene Lreu_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0578 
Symbol 
ID5190103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp647399 
End bp648427 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content38% 
IMG OID640590413 
Product6-phosphogluconolactonase 
Protein accessionYP_001271182 
Protein GI148543812 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGAAC AATTTCTAAT TGGAACTTAT ACTAAAAAAG CAAGTAAAGG GATCTATAAA 
GTTACCCTCG ATACTGCCCA AGAAAAAATA ACGAATGTTG AACTAGCAAT TCCATCTCAA
AAGCCAGCTT ACTTACAAGT TGGTCAAGAT GATCGGATCT ACGCAATTAA ACAAGTAGAT
GATAAGGGAG GAGTTGCCTC TTATTCATTA AGCGACGACA ATGCTAAGAT GTTAAGCGAT
GTTTTAGCTG CCGGTGCCCC TCCTGCATAT GTTGGCGTTG ATAACAAACG GCATTTATTA
TTCAGCGCTA ATTATCATAC AGCAAAAATA GATGTTTTTA AGATCAACGA AGATGGAACG
TTGACACAAA CTGATTCTGT CCTTCATGAA GGAGCAACTG GTCCTGAACC TGAACAAGAG
GCTCCACATG TTCATTATGC CGATCTAACT CCTGACAATC GTCTAGTTGT ATGTGACTTA
GGAATGGATC TTGTTGTGGT TTACGATGTC TCTGATGATG GTAAATTAAC TGCTGTCTCT
CGCTACAAGT GTGAAGATGG CTTTGGTACC CGTCATATAG CTTTCCATCC AAATGGTAAT
TATGCTTATC TTTTAGGTGA ACTAAGCAGT AAACTAGAAG TACTCAAGTA TAATAGTAAC
GATGCATCAT TTAAGCACCT TCAAACGCTC AAAACAATTC CTGAAGACTG GACAGCTCAC
AATGGAGCAG CTGCTATCCG GATCTCAAAT GATGGTAAAT TTGTCTATAC TTCAAATCGT
GGTGAAAACA CCATTGCCGT CTTTGAAGTC CAACCAGATT TTACCGTTAA ACATATTCAA
TCAATTTCAA CTGAAGGAGA TTTTCCACGC GATTTCAATC TAAATCAAGA TGAAAATTAT
CTTTTAGCTT CAAATCAGAA CTCTGATAAC CTTACGCTTT ATAAACGAAA TCCATCAACT
GGTAAGTTAA CTCTTCTTCA AAAAGATGTT AGTTGTCCAG AACCAGTGTG TGTAATGAAG
TGGAAATAA
 
Protein sequence
MIEQFLIGTY TKKASKGIYK VTLDTAQEKI TNVELAIPSQ KPAYLQVGQD DRIYAIKQVD 
DKGGVASYSL SDDNAKMLSD VLAAGAPPAY VGVDNKRHLL FSANYHTAKI DVFKINEDGT
LTQTDSVLHE GATGPEPEQE APHVHYADLT PDNRLVVCDL GMDLVVVYDV SDDGKLTAVS
RYKCEDGFGT RHIAFHPNGN YAYLLGELSS KLEVLKYNSN DASFKHLQTL KTIPEDWTAH
NGAAAIRISN DGKFVYTSNR GENTIAVFEV QPDFTVKHIQ SISTEGDFPR DFNLNQDENY
LLASNQNSDN LTLYKRNPST GKLTLLQKDV SCPEPVCVMK WK