Gene Lreu_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0570 
Symbol 
ID5189555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp634420 
End bp635796 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content36% 
IMG OID640590401 
Productpeptidase U34, dipeptidase 
Protein accessionYP_001271175 
Protein GI148543805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4690] Dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00328479 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACATA CATGTACAAT GTTTTTAGCA GGAAAGAATG CAACGATTGA TGGGTCAACT 
ATAGTTTGTC GTGAGGAAGA TTATGGTAAT GCATTTAATC CTCAAAGATT TGTATTAGTA
AAACCAGAAA GACAGCCACG TCAATATCAA AGCAAAACAA CTGACTTTAA AATTGATTTA
CCAGTTCCTA AGCTAAAATA TACTTCTACG CCAGATGCTG ACGATAAAGA TGGAATTTTT
GGTGCAGGCG GTATCAATGG TGTAAATGTT GCGATGAGTG CGACTGAAAC TATTACTACT
AATGCCCGGA TATTAGCAAT AGATCCTTAT AACACTTTAT CTGGAATTGG CGAAGAAGAT
TTTGTAACAT TAGTCCTTCC TTATATTAAG AGTGCTCAAG ATGGTGTTAA GAAACTAGGA
AGTTTATTAG AAAAGTATGG TACTTATGAG GCTAATGCGA TAGCTTTTAG TGATAATAAT
GAAGTGTGGT ATATGGAAAC GATTGGCGGT CATCATTGGG CAGCTGTTAA AATTCCTGAT
AGTGCCTATG TGATTGCTCC TAATCGATTT AACATTACTA ATTTTGATTT TGACGGTCCC
AACACAATGA GTTCACCAAA TTTGAAACAG TGGATTGATC AAAATAAGTT AAATCCTAGC
GAGAATGAAT ACAATTTACG ACGTATTTGT GGAAGTGCAA CTGCTACTGA TACTGTCTAC
AACAACCCAC GAGCATGGTA TGTTCAGCAG CAATTAGGGA CGATAAATGC TAATCCGCAA
AGTAATAACC TTCCATTCAT CTGTTATGCA AAAGAAAAGC TTACTGTAAC TACAATCAAG
AAGTTAATGA GTTCTCATTA TCAAGGGACA GCTTTTGATC CATATCATTT AGAAAGAGAT
AAAGCACCAT TTAGGTCAAT TGCATTAAAC CGAAACTTAG AATTACATAT TTTACAAATA
CGTAATAATG TTCCTGCAAG TATTGCTGGT GTCCATTGGT TGGCATTTGG CCCTAATACT
TTTAATGCTG TGGTTCCCTT TTATGCAAAT ATTGACGATA CCCCAATCCC TTATCGAAAC
ACTAGTACTG AATATTCAAT AGACGATATG TATTGGCTCA CTCATACAAT TGCTGCGCTT
GGGGACCAAA ATTATCGGCA AGCACAGAGT ATTGAAGAAA ACTTTGAATT GCAAGTAATG
GCAAAAACAA TGAATGTTCA AAAGAATACG GATAAGGAAA TAGCAGAACA CCAGGATGTG
AGTGCATTTT TAACCACAAT TAATAATCGG ATGGCCGAAA CCGCAGTGGA CGAAAGCAAA
AAATTACTAG GGAAACTAGT AAAGCTTACT TTTTCAAGAG AACGATTACA ATTCTAG
 
Protein sequence
MQHTCTMFLA GKNATIDGST IVCREEDYGN AFNPQRFVLV KPERQPRQYQ SKTTDFKIDL 
PVPKLKYTST PDADDKDGIF GAGGINGVNV AMSATETITT NARILAIDPY NTLSGIGEED
FVTLVLPYIK SAQDGVKKLG SLLEKYGTYE ANAIAFSDNN EVWYMETIGG HHWAAVKIPD
SAYVIAPNRF NITNFDFDGP NTMSSPNLKQ WIDQNKLNPS ENEYNLRRIC GSATATDTVY
NNPRAWYVQQ QLGTINANPQ SNNLPFICYA KEKLTVTTIK KLMSSHYQGT AFDPYHLERD
KAPFRSIALN RNLELHILQI RNNVPASIAG VHWLAFGPNT FNAVVPFYAN IDDTPIPYRN
TSTEYSIDDM YWLTHTIAAL GDQNYRQAQS IEENFELQVM AKTMNVQKNT DKEIAEHQDV
SAFLTTINNR MAETAVDESK KLLGKLVKLT FSRERLQF