Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0570 |
Symbol | |
ID | 5189555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 634420 |
End bp | 635796 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640590401 |
Product | peptidase U34, dipeptidase |
Protein accession | YP_001271175 |
Protein GI | 148543805 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4690] Dipeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00328479 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACATA CATGTACAAT GTTTTTAGCA GGAAAGAATG CAACGATTGA TGGGTCAACT ATAGTTTGTC GTGAGGAAGA TTATGGTAAT GCATTTAATC CTCAAAGATT TGTATTAGTA AAACCAGAAA GACAGCCACG TCAATATCAA AGCAAAACAA CTGACTTTAA AATTGATTTA CCAGTTCCTA AGCTAAAATA TACTTCTACG CCAGATGCTG ACGATAAAGA TGGAATTTTT GGTGCAGGCG GTATCAATGG TGTAAATGTT GCGATGAGTG CGACTGAAAC TATTACTACT AATGCCCGGA TATTAGCAAT AGATCCTTAT AACACTTTAT CTGGAATTGG CGAAGAAGAT TTTGTAACAT TAGTCCTTCC TTATATTAAG AGTGCTCAAG ATGGTGTTAA GAAACTAGGA AGTTTATTAG AAAAGTATGG TACTTATGAG GCTAATGCGA TAGCTTTTAG TGATAATAAT GAAGTGTGGT ATATGGAAAC GATTGGCGGT CATCATTGGG CAGCTGTTAA AATTCCTGAT AGTGCCTATG TGATTGCTCC TAATCGATTT AACATTACTA ATTTTGATTT TGACGGTCCC AACACAATGA GTTCACCAAA TTTGAAACAG TGGATTGATC AAAATAAGTT AAATCCTAGC GAGAATGAAT ACAATTTACG ACGTATTTGT GGAAGTGCAA CTGCTACTGA TACTGTCTAC AACAACCCAC GAGCATGGTA TGTTCAGCAG CAATTAGGGA CGATAAATGC TAATCCGCAA AGTAATAACC TTCCATTCAT CTGTTATGCA AAAGAAAAGC TTACTGTAAC TACAATCAAG AAGTTAATGA GTTCTCATTA TCAAGGGACA GCTTTTGATC CATATCATTT AGAAAGAGAT AAAGCACCAT TTAGGTCAAT TGCATTAAAC CGAAACTTAG AATTACATAT TTTACAAATA CGTAATAATG TTCCTGCAAG TATTGCTGGT GTCCATTGGT TGGCATTTGG CCCTAATACT TTTAATGCTG TGGTTCCCTT TTATGCAAAT ATTGACGATA CCCCAATCCC TTATCGAAAC ACTAGTACTG AATATTCAAT AGACGATATG TATTGGCTCA CTCATACAAT TGCTGCGCTT GGGGACCAAA ATTATCGGCA AGCACAGAGT ATTGAAGAAA ACTTTGAATT GCAAGTAATG GCAAAAACAA TGAATGTTCA AAAGAATACG GATAAGGAAA TAGCAGAACA CCAGGATGTG AGTGCATTTT TAACCACAAT TAATAATCGG ATGGCCGAAA CCGCAGTGGA CGAAAGCAAA AAATTACTAG GGAAACTAGT AAAGCTTACT TTTTCAAGAG AACGATTACA ATTCTAG
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Protein sequence | MQHTCTMFLA GKNATIDGST IVCREEDYGN AFNPQRFVLV KPERQPRQYQ SKTTDFKIDL PVPKLKYTST PDADDKDGIF GAGGINGVNV AMSATETITT NARILAIDPY NTLSGIGEED FVTLVLPYIK SAQDGVKKLG SLLEKYGTYE ANAIAFSDNN EVWYMETIGG HHWAAVKIPD SAYVIAPNRF NITNFDFDGP NTMSSPNLKQ WIDQNKLNPS ENEYNLRRIC GSATATDTVY NNPRAWYVQQ QLGTINANPQ SNNLPFICYA KEKLTVTTIK KLMSSHYQGT AFDPYHLERD KAPFRSIALN RNLELHILQI RNNVPASIAG VHWLAFGPNT FNAVVPFYAN IDDTPIPYRN TSTEYSIDDM YWLTHTIAAL GDQNYRQAQS IEENFELQVM AKTMNVQKNT DKEIAEHQDV SAFLTTINNR MAETAVDESK KLLGKLVKLT FSRERLQF
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