Gene Lreu_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0565 
Symbol 
ID5189390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp623082 
End bp623729 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content37% 
IMG OID640590372 
ProductSNARE associated Golgi protein 
Protein accessionYP_001271170 
Protein GI148543800 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000000222667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAACTC TTATTGATTT TATACTACAT ATTGATATTC ATTTAATTCA GATTGTTAAT 
CAATTCGGTG ATGCGACCTA TTTAATTTTA TTTGCTATTA TCTTTATCGA AACTGGTGCA 
GTCATAATGC CCTTTCTACC TGGAGATTCC CTTCTCTTTG CTGCAAGTGC GCTAGCTGCT 
GACCCTCGTT ATCATCTTAA TATTTGGATT TTTATTTTCA TCTTCTTATG TGCCTGTTTG 
GGTGGAGACT CCCTTAACTT TTTAATTGGT CATAAGATTG GTAAAAGTCT TTCTAACCAT 
TCACTTTTTG GTAAATTGAT TGATAAAGAT AGTCTAGAAC GTGCCGAAGT CTTCTTTGAA 
AAGCATGGTG CACCGGCTAT TATTCTTGCC CGTTTTATTC CGATTATTAG AACATTTGCT 
CCGTTTGCGG CGGCAGGTTC AGGTTTTCCA TATAAGCAAT TTATTCGTTA TAGTGTAATT 
GGCTGTGTTG TATGGGTAGC GCTTTGCTGT GGATGTGGTT ACTTCTTCGG TAATCTTCCG 
TTCGTTCAAG AACACTTCTC TGTAATCATT CTTGCAATTA TTGTGGTTAC TTTAATTCCA 
GCAGTTATCG GAGCATTACG TTCGCGCTTT GTTAAAGAAG ATGCGTAA
 
Protein sequence
MATLIDFILH IDIHLIQIVN QFGDATYLIL FAIIFIETGA VIMPFLPGDS LLFAASALAA 
DPRYHLNIWI FIFIFLCACL GGDSLNFLIG HKIGKSLSNH SLFGKLIDKD SLERAEVFFE 
KHGAPAIILA RFIPIIRTFA PFAAAGSGFP YKQFIRYSVI GCVVWVALCC GCGYFFGNLP 
FVQEHFSVII LAIIVVTLIP AVIGALRSRF VKEDA