| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0553 |
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| Symbol | |
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| ID | 5188976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 614539 |
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| End bp | 615516 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640590360 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001271158 |
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| Protein GI | 148543788 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGTT TTGAAGAAGA ATTAACAAGA ATAATTCGCA AGCAACCGAG TGACCTGTAC
ATCTTACCTC ATGATAGGTA TTATCAATTA TCCTTAGCGA TAAAGGGGAC CCTATTTCCT
TTTAAACAGG TTACGCGTGA TTATGGTCAA CGTTTTATCT CATACTTAAA ATATTGCGCC
AATATGGCAG TTAGTGAGCA TCGACGACCC CAGCTAGGCG CTTTTAAATT TACTTATGCT
CACCAAAAGA TCAATTTACG CTTATCAAGT GTTGGTGATT ATCAAGGGAG GGAATCATTA
GTTATTCGCT TTATATATCC CCTTAATGAT ATTAGGTTTA ATTTTTTAGT TCCTCACCAG
TGGGAAATAT TACAGAAGTA CCGTCAACAA AGAGGTTTGA TTCTTTTTGC CGGGCCAATG
GGGGCTGGTA AAACAACTAC CATGTATCAG CTTGCTCGAC AGTTATTACC GAAACAAATT
GTATTAACAA TTGAGGATCC CGTAGAAATT GACCATCCGG GATTTATTCA ATTGCAAGTA
AATGAATTAG CGGGGATGGA CTATGAAAGT TTATTAAAAT TGGGATTACG GCATCGCCCA
GATGTGTTTA TCATTGGAGA AATCCGTGAT TCACAGACAG CTGCTATGTC AGTTCAAGCC
GCATTAAGTG GTCACTTAGT TTTGGGAACT ATCCATGCTC GAAATGCTTA TGGCGTTGTT
TCTCGTCTTC AACAATTAGG GATAGATTCT TATTATCTTC AGCAAGTATT AACGGCGGTA
TCTTATCAGC GTTTAATTCC GTTGGTGAAT GGAGAACAAG CCATCTTATG TGACCTGTTA
AATCGACATC AATTTAGTGA TTTGCTCAAT GGCACCAAGA AAGGAGGAAT GTCTAATGAA
TGGTCAAAAG CTCTTCAGCA GGCTGTGGAA AATGGAGAAA TTACGGAGAA TACTGCACGT
CAATACCAAC AAGGTTAA
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| Protein sequence | MPSFEEELTR IIRKQPSDLY ILPHDRYYQL SLAIKGTLFP FKQVTRDYGQ RFISYLKYCA
NMAVSEHRRP QLGAFKFTYA HQKINLRLSS VGDYQGRESL VIRFIYPLND IRFNFLVPHQ
WEILQKYRQQ RGLILFAGPM GAGKTTTMYQ LARQLLPKQI VLTIEDPVEI DHPGFIQLQV
NELAGMDYES LLKLGLRHRP DVFIIGEIRD SQTAAMSVQA ALSGHLVLGT IHARNAYGVV
SRLQQLGIDS YYLQQVLTAV SYQRLIPLVN GEQAILCDLL NRHQFSDLLN GTKKGGMSNE
WSKALQQAVE NGEITENTAR QYQQG
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