Gene Lreu_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0545 
Symbol 
ID5188384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp607691 
End bp608527 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content36% 
IMG OID640590352 
Producthydrolase 
Protein accessionYP_001271150 
Protein GI148543780 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA AATTAATCGC TACTGATATG GACGGAACCT TTTTACGAGA TGACCATACT 
TACAATCATT CTTTATTTGC AAAGGTCTTT CGTCAACTTG AACGCCATAA TATCTACTTT
GTCGCTGCTA GCGGATCCAG TTTTCCACGG TTGCAACGAG AATTTAAAGA CTACACCGCC
AAGATGGGAT TTATTTCGCA AAACGGATCA GTTATCCATT TAGGAAGCAA ATTATTTAAA
TCTTTTCCTA TTAATCAGGA ATCTTTAGCC CGAGTTATTC ATGTTCTTGA CCGTTTCTAT
GGTCCGCAAG ATATTAATCA ATTAGTAATC TCTACTAGTG AAAAATCTTA TGTCGATCAG
GGGATGAGTG CTCATGATTT CAACATTGTG AAACTTTTTT ATGAAAATGT AGAGCGTATC
CCTGATATCC GGCAGATTTT CACTCAACGG CCAACTGAAG ATTTTACCAA GATATCAATT
AATTTTGCTA ATCATATCGA TCTAAAAAAA GTTACAACAA CCTTAGATGG TTACTTACCG
CCATCTTTAA TCATGGAAAA TTCAGGCTTT AATACTGACT TAATCGGTAA TGCTGCTGCA
ACTAAACAAA ACGCTCTTTC CCTTTTGCAG TCCCACCTTA ATTTAAAGGC AAATGAAATT
GTTACGTTTG GTGACAATGA AAATGACCTT GGGATGTTAG CGATGACGAG TCAAAGCTAC
GCAATGCAGA ATGCACAACC AATTATTCAA ATGCAAGCTG CCCACACCAC CACAATTGAT
AATAATCATG ATGGCGTCTT GCAGACTATT AACCAGTTAA TTAAAAATGA ACGATAA
 
Protein sequence
MSIKLIATDM DGTFLRDDHT YNHSLFAKVF RQLERHNIYF VAASGSSFPR LQREFKDYTA 
KMGFISQNGS VIHLGSKLFK SFPINQESLA RVIHVLDRFY GPQDINQLVI STSEKSYVDQ
GMSAHDFNIV KLFYENVERI PDIRQIFTQR PTEDFTKISI NFANHIDLKK VTTTLDGYLP
PSLIMENSGF NTDLIGNAAA TKQNALSLLQ SHLNLKANEI VTFGDNENDL GMLAMTSQSY
AMQNAQPIIQ MQAAHTTTID NNHDGVLQTI NQLIKNER