Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0543 |
Symbol | |
ID | 5188541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 606603 |
End bp | 607121 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590350 |
Product | phosphodiesterase |
Protein accession | YP_001271148 |
Protein GI | 148543778 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.10472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC TAGTTGTAAG TGATAACCAT CGAGAAGAAA AAATTTTGAC AGAGATTGTT CAAAAAATGG GGAATCAAGT TGACCTAATG ATTCACTGTG GGGATTCAGA ATTAGCTCCT GATCAGGAAC CGATGAGCAA TTTTAAGGCA GTGAAGGGGA ATAATGATTA TGGTTTGTCG TACCCTAATG AGTTGGTAAT TAATGCTGGG CAAGAGCAGC TCTATCTAAC TCATGGTCAT TTACAGCGGG TCAATTTTTC TCTGACCCCT CTGATGCTTA CCGGCCAAGA AAAAGGTGCC TCCATTGTGT GCTATGGGCA TACTCATCAG TTAGGAGCCG TTTACGATCA TCAAATGCTA ATAATTAATC CTGGGAGCAT CAGTTTTCCT CGTGGTGAAT ATGCTAAACT CGGGGGAACT TTTGCAATTG TTGATGCGCA GCCTGAGCGG TTTATTGTTG ATTATTATAA CCGTCAGATG GAAGCTGTTC CTGAATTACG TTGTGAATTC AGTCGTTAG
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Protein sequence | MKILVVSDNH REEKILTEIV QKMGNQVDLM IHCGDSELAP DQEPMSNFKA VKGNNDYGLS YPNELVINAG QEQLYLTHGH LQRVNFSLTP LMLTGQEKGA SIVCYGHTHQ LGAVYDHQML IINPGSISFP RGEYAKLGGT FAIVDAQPER FIVDYYNRQM EAVPELRCEF SR
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