Gene Lreu_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0543 
Symbol 
ID5188541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp606603 
End bp607121 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content41% 
IMG OID640590350 
Productphosphodiesterase 
Protein accessionYP_001271148 
Protein GI148543778 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.10472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TAGTTGTAAG TGATAACCAT CGAGAAGAAA AAATTTTGAC AGAGATTGTT 
CAAAAAATGG GGAATCAAGT TGACCTAATG ATTCACTGTG GGGATTCAGA ATTAGCTCCT
GATCAGGAAC CGATGAGCAA TTTTAAGGCA GTGAAGGGGA ATAATGATTA TGGTTTGTCG
TACCCTAATG AGTTGGTAAT TAATGCTGGG CAAGAGCAGC TCTATCTAAC TCATGGTCAT
TTACAGCGGG TCAATTTTTC TCTGACCCCT CTGATGCTTA CCGGCCAAGA AAAAGGTGCC
TCCATTGTGT GCTATGGGCA TACTCATCAG TTAGGAGCCG TTTACGATCA TCAAATGCTA
ATAATTAATC CTGGGAGCAT CAGTTTTCCT CGTGGTGAAT ATGCTAAACT CGGGGGAACT
TTTGCAATTG TTGATGCGCA GCCTGAGCGG TTTATTGTTG ATTATTATAA CCGTCAGATG
GAAGCTGTTC CTGAATTACG TTGTGAATTC AGTCGTTAG
 
Protein sequence
MKILVVSDNH REEKILTEIV QKMGNQVDLM IHCGDSELAP DQEPMSNFKA VKGNNDYGLS 
YPNELVINAG QEQLYLTHGH LQRVNFSLTP LMLTGQEKGA SIVCYGHTHQ LGAVYDHQML
IINPGSISFP RGEYAKLGGT FAIVDAQPER FIVDYYNRQM EAVPELRCEF SR