| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0534 |
|---|
| Symbol | |
|---|
| ID | 5188468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 600012 |
|---|
| End bp | 600278 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640590341 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001271139 |
|---|
| Protein GI | 148543769 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4472] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000357498 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAA ATGATAAAAC GATGTTCTTT GATTTTGGTC AAGAACGTCA AGAAGATATT
AAGCAAACAT TAAAGACGGT TTATGAATCA TTAGAAGAAA AGGGATATAA CCCGATTAAC
CAAATTGTTG GTTATCTTTT ATCTGGTGAT CCTGCTTATA TTCCGCGTTT GAATGATGCA
CGTAACTTGA TTCGTCAACA TGAACGTGAC GAAATTATTG AAGAGCTTGT TCGGTCATAC
CTAAAGAATA ACGGTGAAAC TAAATGA
|
|---|
| Protein sequence | MATNDKTMFF DFGQERQEDI KQTLKTVYES LEEKGYNPIN QIVGYLLSGD PAYIPRLNDA
RNLIRQHERD EIIEELVRSY LKNNGETK
|
|---|
| |