| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0524 |
|---|
| Symbol | |
|---|
| ID | 5188897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 584710 |
|---|
| End bp | 586251 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590331 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001271129 |
|---|
| Protein GI | 148543759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00240284 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCG CGCTTGCTAT GGTTGTCGGA ATTATTGTCG GCTATGTAAT TCGCAAGGTT
TCATATGAAA AACAAGTTGC AGAAGCACAT AATGATGCTA AAGGTATTAT TTCTAAAGCA
AAACAAGAAG CAGTAACGGC GAAAAAAGAA GCTATTTTAG AAGCGAAAGA AGAGAGTCAT
CAATACCGCG AGAGAGTGGA AGATGAGTTA AAACAGCGGC GGAGTGAGGT CCAACGACAG
GAAGACCGAT TACTCCAACG AGAGGCTTCT TTAGATCATA AGGATAGCGC TCTAGAAAAA
AGAGAGAATG CAGTTGGCGT TCGTGAACGT AAATTAGATC AAGAAAAAGA GCAGCTTCAT
CAATCAAAGG AACAAGCAGA AGCCTTAATT GAACAACGCA AACAAGAAGT TGAAAAAGTC
GCTCAAATGT CACAAGAAGA TGCTAAGCAG TTATTATTAT CTGAAGTAAA AGAACAGTTA
AAAACTGAAC GAGCAGTAAT GATTCGTGAC AGTGAACAAG AAGCGGAACT TTCTGCAGAA
CGTAATGCAA AGAAATTAAT TGTTGAAGCA ATTCAACGTA GTGCTGCGGA TGTTGTCTCA
GAGACGACTG TTTCGGTTGT TAATCTTCCT AATGATGATA TGAAGGGAAG AATAATTGGT
CGTGAAGGTC GAAATATTAG AACTTTAGAG ACGTTAACAG GTATTGATTT GATTATTGAT
GATACGCCAG AAGCTGTCGT ATTGAGCGGC TTTGATCCTG TACGACGTGA GATTGCTAAG
ATCGCGCTTG AAAAATTAAT TCAAGATGGT CGTATTCATC CTGCACGAAT TGAAGAAGCA
GTTGATAAGG CTCGTAAGCA GATGGATACT CAACTACGGG AGACTGGTGA GCAAGCATTG
TTTGATCTAG GAATTCATTC AATGCATCCA GACCTAATTA AGACGGTCGG AAGAATGAAG
TACCGGACTA GTTACGGTCA AAATGTCTTA GACCACTCAA TCGAAGTTGC TAAGTTAGCC
GGAATTATGG CTGCTGAACT TGGGGAAGAT GTTACATTAG CAAAACGTGC TGGACTCCTC
CATGATATTG GGAAGGCAAT TGATCATGAA GTTGATGGTT CACATGTTGA GTTAGGTGTA
GAACTAACCC GCAAGTATAA AGAAAATAAA GTGGTTATCA ATACGATTGC CTCTCACCAT
GGAGATGTCC CTGCTAATTC TGTAATTGCT GTTCTTGTAC AAGCAGCAGA TGCAATTTCA
GGGGCCCGTC CTGGTGCACG AAGCGAGTCA TTAGAACAAT ACATTCAACG TTTAAAGAAA
CTAGAAAGCA TAGCAAACAG TTATGATGGT GTCGACCATA GTTATGCAAT TCAAGCTGGT
CGAGAACTTC GCGTGATTGT CAAACCGAAG AAGATTTCTG ATTTGCAGGC AACAACTTTG
TCACATGATA TTAAGAACAA AATTGAAAAG CAATTAGAAT ATCCAGGACA TATTAAAGTA
ACCGTTATTC GGGAAGTTCG AGCAGTTGAT TATGCTAAAT AA
|
|---|
| Protein sequence | MFAALAMVVG IIVGYVIRKV SYEKQVAEAH NDAKGIISKA KQEAVTAKKE AILEAKEESH
QYRERVEDEL KQRRSEVQRQ EDRLLQREAS LDHKDSALEK RENAVGVRER KLDQEKEQLH
QSKEQAEALI EQRKQEVEKV AQMSQEDAKQ LLLSEVKEQL KTERAVMIRD SEQEAELSAE
RNAKKLIVEA IQRSAADVVS ETTVSVVNLP NDDMKGRIIG REGRNIRTLE TLTGIDLIID
DTPEAVVLSG FDPVRREIAK IALEKLIQDG RIHPARIEEA VDKARKQMDT QLRETGEQAL
FDLGIHSMHP DLIKTVGRMK YRTSYGQNVL DHSIEVAKLA GIMAAELGED VTLAKRAGLL
HDIGKAIDHE VDGSHVELGV ELTRKYKENK VVINTIASHH GDVPANSVIA VLVQAADAIS
GARPGARSES LEQYIQRLKK LESIANSYDG VDHSYAIQAG RELRVIVKPK KISDLQATTL
SHDIKNKIEK QLEYPGHIKV TVIREVRAVD YAK
|
|---|
| |