Gene Lreu_0523 details

Gene Information

• Locus tag: Lreu_0523
• Symbol: recA
• ID: 5189467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 583386
• End bp: 584474
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640590330
• Product: recombinase A
• Protein accession: YP_001271128
• Protein GI: 148543758
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000000473291
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTGACC AACGAAAAGC AGCATTAGAT GTTGCTATCA GAAAGATCGA AAAGAACTTC 
GGTAAGGGTT CTATTATGCG AATGGGTGAT GCCACTGATA TGAAGGTTGC TTCAGTTTCT 
AGTGGTTCCC TTGCTATTGA CAAGGCACTT GGAATTGGTG GATATCCTCG TGGTCGGATA 
GTTGAAATTT ATGGTCCTGA AAGTTCTGGT AAGACTACTG TAGCATTGCA TGCAGTTGCA 
GAAGTACAAC GGCAAGGCGG GACAGCAGCC TATATTGATG CCGAAAATGC TCTTGATCCT 
CAATATGCAG AAGCCTTAGG TGTTAATATT GATGACCTAT TGCTTTCGCA GCCTGATAGT 
GGTGAAGAAG GATTAGAAAT TGCTGATGCA TTGATTTCAA GTGGAGCAGT TGACTTAGTA 
ATTGTTGATT CGGTTGCAGC ATTAGTTCCT CGTGCTGAAA TTGATGGTGA TATGGGTGAT 
ACCCATGTTG GATTACAAGC TCGTTTGATG TCTCAGGCTC TTCGGAAGCT TTCCGGTGAA 
ATTAATAAGA CAAAGACAAT TGCTATCTTT ATTAACCAAA TCCGTGAAAA AGTGGGAGTG 
ATGTTTGGTA ACCCTGAAAC AACAACTGGT GGACGGGCAC TTAAATTTTA CTCAACTATC 
CGGATGGAAA TTCGTCGTGC GGAACAAATT AAGAATGGTA CGGATGTTAT TGGAAATAAA 
GCTAAAGTAA AGATTGTTAA AAATAAGGTT GCTCCGCCAT TCAAACGTTG TGAAGTTGAC 
ATTATGTATG GTGAGGGGAT TTCTAAGACT GGTGAATTGC TAGATATGGC AGTTGAAAAC 
GATCTTGTTG ATAAGAGCGG TGCCTGGTAC TCATATGGTA GCGAACGTAT TGGGCAAGGT 
CGTGAAAATG CTAAAAAGTG GCTTAAGGAA CATCCAGACA GCATGAATGA ATTAATGGAT 
AAAGTTCGTG TTGCAAATGG AATGGAACCG TTAAATGAAA AGTCAACGAA AGAAACTGCT 
GATGATAAAG CCAGTGGTAA GACCGGTGAA AATAAACAAG AAACAATTGA AGAAGCAAGT 
AAAGAATAA 

 

Protein sequence

MADQRKAALD VAIRKIEKNF GKGSIMRMGD ATDMKVASVS SGSLAIDKAL GIGGYPRGRI 
VEIYGPESSG KTTVALHAVA EVQRQGGTAA YIDAENALDP QYAEALGVNI DDLLLSQPDS 
GEEGLEIADA LISSGAVDLV IVDSVAALVP RAEIDGDMGD THVGLQARLM SQALRKLSGE 
INKTKTIAIF INQIREKVGV MFGNPETTTG GRALKFYSTI RMEIRRAEQI KNGTDVIGNK 
AKVKIVKNKV APPFKRCEVD IMYGEGISKT GELLDMAVEN DLVDKSGAWY SYGSERIGQG 
RENAKKWLKE HPDSMNELMD KVRVANGMEP LNEKSTKETA DDKASGKTGE NKQETIEEAS 
KE