Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0513 |
Symbol | |
ID | 5188950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 573369 |
End bp | 574226 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640590320 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001271118 |
Protein GI | 148543748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAT TTTTTTCCAA TCGCCGATTA GTTATTGCTG TGATAATTCT AGTTGTCTGT TTTGGACTAA TGGCAGGTTC TGTTTCTTTA CGGAATAGGC GAAATACACC ACCGATCATC CAACAATTTG GAAATGATAT TGTTGGCTTT GTTGATAGTG CAGTTGCTCT CCCTGTAAAT TGGGCACAGA CAAGTGTGAG TTCAATAAAT GGGTTGATGA ATACTTATTC TGAAAACCGT GAACTTAAAC AGCAAGTAAC TGAATTAGCA CAAACTAAAG TCCGTGATCA GACCTTAGCT CATGAAAACA AACAATTAAA ACAACAGTTA AAACTTAATA ATTCAATGAC CGACTATAAT ACAGTTACAG CGGCTGTGTT AATGCGCACA CCTTCTTCGT GGCAAAGACA ACTCGTGATT AATAAGGGGC AATCTAGTGG TATTAAGAAG AATATGCCCG TTATGAGTGG TAGTGGGTTA ATTGGTCGGA TTACAGAAGT AAATAAAACT AATAGCAAAG TTGAATTATT GAGTGATACC AGTGAATCAT CAAACCGTTT TGCAATTACT CTTAATGGTC AAAATGGGAA GGTGATTAAT GGGATTATCA CCGGATATAA TGCAAGAAAT AACGAGCTTG AAATGGGACA AGTAACTTCT AAAGCTAAAA TAAAAAAAGG TACCCGAGTA GTAACCAGTG GAATGGGTGG TGTGACACCT AAGGGACTTT ATGTTGGCCG CGTGTCACGT GTCGGTAAAG ATGATTATGG TCTCGCCCAG AAAATCTATA TTACTCCAGC AACGGACTTT AATGATATTA ATATTGTTAC AGTTGCTGAA GCGGCCTCAC AGGAGTGA
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Protein sequence | MQKFFSNRRL VIAVIILVVC FGLMAGSVSL RNRRNTPPII QQFGNDIVGF VDSAVALPVN WAQTSVSSIN GLMNTYSENR ELKQQVTELA QTKVRDQTLA HENKQLKQQL KLNNSMTDYN TVTAAVLMRT PSSWQRQLVI NKGQSSGIKK NMPVMSGSGL IGRITEVNKT NSKVELLSDT SESSNRFAIT LNGQNGKVIN GIITGYNARN NELEMGQVTS KAKIKKGTRV VTSGMGGVTP KGLYVGRVSR VGKDDYGLAQ KIYITPATDF NDINIVTVAE AASQE
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