Gene Lreu_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0503 
Symbol 
ID5188954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp558220 
End bp559440 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content39% 
IMG OID640590310 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_001271108 
Protein GI148543738 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000116963 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATATA CAGAAATCAT GGTTCGTTAT GGTGAGCTTT CGACAAAGGG ACATAATAAA 
AAGTCCTTTA TTGATCGTTT AGGGGTAAAC GTACGAAAGG CCCTTCATAG CTTTGACCAG
GTAAAGGTGC ATGCCCAACG TGATCGGTTG CATGTTGAAT TAAATGGAGC TGACTATGAT
CAAGTGATGA ATCGGTTGAA GTTAGTGTTT GGGATTCAAA ACTTCTCTCC ATCAATTAAA
GTTGATAAGA CGTTTGAAGC GACTGCAGAG GCAGCAGCGC AAATGATCGC TGAACAAGTT
GATAAACCAA TTACCTTTAA AGTGGAAACT CGTCGATCAG ATCACCAATT TGCAATTGAT
ACCTTTGAAA TGAACAACAA GCTAGGGGGA TACCTCTTAG ATAAGTTTCC TGATAAATTA
AAAGTTGATG TTCACCATCC AGACCTAACT TTACGAGTTG AGATCCGTCT TAATGGGATT
TTCCTTTCAA GTGAAACGAT TAAGGGTGCC GGTGGTTTGC CAGTTGGTAC TGCTGGTAAA
GGAATGATGA TGATGTCTGG TGGAATTGAT TCACCAGTAG CTGCTTACCT TGGGATGAAG
CGTGGTGTTT CAATGGAAAT GGTTCACTTC TTTAGTCCGC CATATACTAG TCCCCAAGCT
TTAGCAAAGG CCAAACAACT AACTGAACGT CTTGCAAAAT ATAGTGGAAG TATTAAGTTT
ATTCAGGTGC CATTTGCTGA AATTCAAGAA ACAGTAAAGG AAAAAGTTCC TGAAGGCTAC
TTAATGACAA TTCAACGGCG AATGATGCTT CGGTTGGCAG CTGCCTTAAT GATTAAGCGT
CATGGCCTGG CTATTTTTAA TGGTGAATCA TTAGGTCAAG TTGCTTCTCA GACAATGGAA
AGTATGCTGG CGATTAATGA TGTAACTTCT TATCCGGTAT TGCGACCAGT ATTGTCATTT
GATAAGACCG AAATCATTAA AATTGCCCAA GATATTGATA CTTATGATCT TTCAATTCTT
CCATATGAAG ACTGTTGTAC TGTCTTTACA CCGCCATCGC CAAAAACCCG GCCAAATGTT
AAGCGGGCTC GTGAATACGA AAAACGACTT GATATTGAAG GATTAATGCA ACGAGCTCTT
GATGGGATTG AAATTACGGA AATTCATCCT GGTGAAGATT ATTTAAACCA AAATGAAGAT
GTTTTTGCTG AATTACTTTA A
 
Protein sequence
MQYTEIMVRY GELSTKGHNK KSFIDRLGVN VRKALHSFDQ VKVHAQRDRL HVELNGADYD 
QVMNRLKLVF GIQNFSPSIK VDKTFEATAE AAAQMIAEQV DKPITFKVET RRSDHQFAID
TFEMNNKLGG YLLDKFPDKL KVDVHHPDLT LRVEIRLNGI FLSSETIKGA GGLPVGTAGK
GMMMMSGGID SPVAAYLGMK RGVSMEMVHF FSPPYTSPQA LAKAKQLTER LAKYSGSIKF
IQVPFAEIQE TVKEKVPEGY LMTIQRRMML RLAAALMIKR HGLAIFNGES LGQVASQTME
SMLAINDVTS YPVLRPVLSF DKTEIIKIAQ DIDTYDLSIL PYEDCCTVFT PPSPKTRPNV
KRAREYEKRL DIEGLMQRAL DGIEITEIHP GEDYLNQNED VFAELL