Gene Lreu_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0502 
Symbol 
ID5189559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp557050 
End bp558198 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content40% 
IMG OID640590309 
Productaminotransferase, class V 
Protein accessionYP_001271107 
Protein GI148543737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000217795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTATT TTGATAATAG TGCGACGACA AAGATACTAC CGGATGTTTT GTCGACATAC 
GAAACCGTGA GCCAAAAGAT TTGGGGGAAT CCAAGCAGCT TACATAATTT TGGTGAAAAT
GCTTGGAACC TTCAAGAACA GGCACGCCAG CAGATCGCAA AGCTATTCGG GGTTAAGCCT
AGTGAGATTA TTTTTACTAG TGGTGGTTCT GAAGGAGATA ACTGGGTAAT CAAAGGAACT
GCAATGGCTA AGTACCGTTT TGGCAAACAC ATTATTACGA CCAGTGTTGA ACATGCGGCA
GTAAAAAATG CATTGGAGCA ACTAAAAGAC TTCGGATTTG AAGTTACCTA CCTCCCCGTT
GATAAAGAAG GACGAATTAA TCCTGCTGAT GTTAAAGCTG CCATTCGTCC AGATACTATT
TTAGTGTCTA TCATGGCGGT TAATAATGAA ATTGGAACGG TTCAGCCAAT TAAAGAAGTG
GGAGAAATCC TTAAAGATTA TCCAAATATT CACTTTATGG TGGATGCTGT TCAGGCTATT
GGTAAAGGAT TAGATGACCA AGTATTTAGT GATCGCGTTG ATTTTGCCAC TTTTTCTGGT
CATAAATTTC ATGCCCCACG AGGAACTGGT TTTGTTTATG TCAAGAGTGG CCGTAAGTTA
GAGCCCTTGA TTGCTGGTGG TGGTCAAGAG CGAACACTAC GAAATGGGAC AGAAAATACA
CCGGGTAATG TTGCGATGGC AAAAGCAATT CGGTTAGTAA AGGAAAATGA AGCGGAATCA
GTAAAACTTG AACAGGCAAT CAAAGAACGG ATTTACGACC ATTTAAGTAA ATTTGATCAT
GTGAAATTGA TTTCTGGCCG TGATCAAGGT TTCGCTTCCC ATGTACTATG CTTTGCAATT
GTAGGGGTTC GGGGTGAAAC GATTGTTCAT GCCTTTGAAG ACAAGGATAT CTATATCTCA
ACTACTAGTG CTTGCTCGTC TAAAAAGCAT TCCGAAGCCG GAACATTAGC TGCCATGAAA
GTTCCAGAAG ATATTGCGAC AAGTGCAGTT CGGATTAGTC TTGGGGATCA AAATACCCTT
GAAGAAGCTG ATCAGTTTAA TAAAACATTT GATGAATTAT ACGCTGGCTT TAAGAAAATT
ATTGAATAA
 
Protein sequence
MIYFDNSATT KILPDVLSTY ETVSQKIWGN PSSLHNFGEN AWNLQEQARQ QIAKLFGVKP 
SEIIFTSGGS EGDNWVIKGT AMAKYRFGKH IITTSVEHAA VKNALEQLKD FGFEVTYLPV
DKEGRINPAD VKAAIRPDTI LVSIMAVNNE IGTVQPIKEV GEILKDYPNI HFMVDAVQAI
GKGLDDQVFS DRVDFATFSG HKFHAPRGTG FVYVKSGRKL EPLIAGGGQE RTLRNGTENT
PGNVAMAKAI RLVKENEAES VKLEQAIKER IYDHLSKFDH VKLISGRDQG FASHVLCFAI
VGVRGETIVH AFEDKDIYIS TTSACSSKKH SEAGTLAAMK VPEDIATSAV RISLGDQNTL
EEADQFNKTF DELYAGFKKI IE