| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0494 |
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| Symbol | |
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| ID | 5189001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 546700 |
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| End bp | 548430 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590301 |
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| Product | putative oxalyl-CoA decarboxylase |
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| Protein accession | YP_001271099 |
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| Protein GI | 148543729 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03254] oxalyl-CoA decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000405368 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGGCG ATTCTTTAAA TAAGACAGGT GCCAATTTAT TAATCAAGGC CTTGCAAGAG
AATAATATTA ACCGAATGTA TGGAATAGTT GGAATCCCGG TAACCGATTT AGCGCGGCTC
GCTGAATTAC GCGGAATGAA ATATTATGGT TTTCGCCGTG AAGATTCAGC AGTTAATGCC
GCTGCGGCAA CTGGTTACTT AACGCAAAAA CCTGGCGTTG CATTAACTGT TTCAGCACCC
GGTTTTTTGA ATGGATTAAC AGCTTTAGCT CAAGCTACTA AGAATTGTTT TCCGTTGATT
ATGATTTCAG GTTCGTCTGA ACGCCATATT ATTGACTTAT CACAGGGCGA TTATGAAGGC
CTCGACCAAT ATAATGCGGC AAAACCCTTC TGCAAAAAAG CTTATCGGGT TGATCGAGCA
GAAGATATGG GATTAGCTGT TGCAAGAGCC ATTCGGACAG CAGTTTCAGG CCGCCCTGGT
GGTGTTTATC TTGATATCCC AGCTGACACA ATTGTTCAAG AAGATGATGC TGATCAATCT
AGTTTGGGTG TTTATAAGTT AGTTGATCCT GCCCCTAAAC AGGTACCTAA TGATGAAGCA
ATATCACGAG CGGTTGATTT AATCAAGAAT GCCAAAAAGC CCCTTATTAT TTTAGGAAAA
GGGGCTGCCT ATGATCGGAC CGAAAAACAA GTGCAACAAT TAGTAGCTGA AACGAATATT
CCATTTTTGC CAATGTCGAT GGCAAAAGGG CTAATTCCAG ATGATAGTCC TCATTCTGCT
GCAGCGGCTC GTTCTCTTTC ACTGCGAAAT GCTGACGTAG TAATTGTAAT TGGTGCCCGT
TTAAACTGGA TGCTTTCATA TGGGGATGCA CCACAATTTA ACCCGCATGC AAAATTTGTT
CAGCTAGACA TCGATGCCAC GCAGTTTGAT TCCTCACAGC CAATTAGTGC CCCGCTCCAA
GGAGACCTTA AGTCGATTTT AGATAAATTG GTTCCAGCAC TATTGGCAAC TGGATATCAA
GCGCCCGAAG AATGGTTAGA GCAAATTGCA CAAGATACTG AGAAAAATGA CAAAAAATTC
GCGCAACGAA TTGCTAATGG TAAAGTAGCA CAAAATTTTG GCTATTATGG AGCAATTGCG
CCTATTGCTG AATACTTCCA ACAACATCCA GATACCTATC TAGTCAGTGA GGGGGCTAAT
ACGCTTGACA TTGGACGAGA TATGATTGGA ATGCAACTCC CCCGTCATCG ACTCGACACA
GGAACTTGGG GCGTCATGGG TGTTGGCCTT GGTTATGCAA TTGCGGCAGC AGTTGAAACA
GGAAAACATG TTGTTGCGCT TGATGGCGAT AGTGCATTTG GTTTTGATGG GATGGAGATT
GAAACGATTT GTCGATATAA GTTGCCGATT ACGGTCGTTA TTATCAATAA TGGCGGAATA
TATAACGGAA TCGGCCAAGT TGTTCCTAAT CAACTTGGGC CAACTACTCT TGATCCAACT
GCCAGGTATG ATTTAATGGC TAAGGCCTTT GGTGGTGATA ATTATTTTGT AAGTGATTAC
GATGAGATGA AAAATGTTTT TGCAAGAGCT GTTGACTCGG GGCGACCAAA TATTATTAAT
GTTCAAATTG CACCATCGAT GGGAAAAGAA TCTGGCCATA TTGGGAATCT AAATCCAAAG
CTTAATTTAC AACCACTTGA AGAAAATGAG AGGAGCCATC ATAATGACTG A
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| Protein sequence | MVGDSLNKTG ANLLIKALQE NNINRMYGIV GIPVTDLARL AELRGMKYYG FRREDSAVNA
AAATGYLTQK PGVALTVSAP GFLNGLTALA QATKNCFPLI MISGSSERHI IDLSQGDYEG
LDQYNAAKPF CKKAYRVDRA EDMGLAVARA IRTAVSGRPG GVYLDIPADT IVQEDDADQS
SLGVYKLVDP APKQVPNDEA ISRAVDLIKN AKKPLIILGK GAAYDRTEKQ VQQLVAETNI
PFLPMSMAKG LIPDDSPHSA AAARSLSLRN ADVVIVIGAR LNWMLSYGDA PQFNPHAKFV
QLDIDATQFD SSQPISAPLQ GDLKSILDKL VPALLATGYQ APEEWLEQIA QDTEKNDKKF
AQRIANGKVA QNFGYYGAIA PIAEYFQQHP DTYLVSEGAN TLDIGRDMIG MQLPRHRLDT
GTWGVMGVGL GYAIAAAVET GKHVVALDGD SAFGFDGMEI ETICRYKLPI TVVIINNGGI
YNGIGQVVPN QLGPTTLDPT ARYDLMAKAF GGDNYFVSDY DEMKNVFARA VDSGRPNIIN
VQIAPSMGKE SGHIGNLNPK LNLQPLEENE RSHHND
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