Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0489 |
Symbol | |
ID | 5189466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 543454 |
End bp | 543942 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590296 |
Product | hypothetical protein |
Protein accession | YP_001271094 |
Protein GI | 148543724 |
COG category | [S] Function unknown |
COG ID | [COG5506] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000290968 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAC AAGAAAAAAG TGCTGCTCAA CAGCGAATTG ACAATGCTGT TTACGGTACA CCAAAAATCA AGCCCGATGA ACAGCGAAAA TACCTCGGAA CATTCCGTGA ACGCGTCTGT CTAACAATTA GTGTTCAAGA ACTACAGGAA CAAGATTGGA CAAAGGCATT AACTGCCGAG TTAGATCGTG GAATTGGTAA CCTTGTTTTT ATCAACGGTA ATCTCCCTCA CGACGAAATT CATCCATACA TTCAAACTGC TGCTAAAGAT AATGCCCAGT TTACATTAAA AACTGATCCA GAATATAAAA CTGACCTGGA TTCATTAGCA GTTGTCGTGG CGGCAAAAAC AGCTGTTTAC CAATCACCAG TCGACGTCAA AAAGCGATAT CCTAATCTGG TAAATTCAAA TAATAGTACG ACTGAAAAAA CCAATGATCA ACACCAAAGC TTTTTCCACC ACCTCTTCCA TAGAAAGGAT CGTGGCTAA
|
Protein sequence | MSEQEKSAAQ QRIDNAVYGT PKIKPDEQRK YLGTFRERVC LTISVQELQE QDWTKALTAE LDRGIGNLVF INGNLPHDEI HPYIQTAAKD NAQFTLKTDP EYKTDLDSLA VVVAAKTAVY QSPVDVKKRY PNLVNSNNST TEKTNDQHQS FFHHLFHRKD RG
|
| |