| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0464 |
|---|
| Symbol | |
|---|
| ID | 5189519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 518483 |
|---|
| End bp | 519025 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590271 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001271069 |
|---|
| Protein GI | 148543699 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.375787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTG ATAAGAAGAC AGTTGCTGAT CGCTATGCGA AAGCACTGTT TGAATTGGTC
GATGCTGATA ACGAACTCGA TCAAACTTAT CAAGAATTGA TTGCTTTACG CCAAGTCTTT
GAGGACAACG AGGGATTGGA CGCCGCACTT GCGGGAGTTC AATTGTCACT TGATGAAAAG
AAATCATTGA TTAAAGATTT ACAGCAAGGT GCTTCGAAGT ATGTTGCTAA CTTAATTCAA
ATGGTTTTCG ATTACGGCCG TATTGACTGC ATGGTCGCAA TTATTGATGA GTTTGAACGG
CGGTATGACC GTAAAATGAA GCGGATGCAT GCTGACGTTA CCACAGCGAT CCAACTCGAT
AAACAACAAG AGGATCAACT GAAGGCTAAT CTTGCAAAAC GTTTTGGTGC TAATGAAGTT
ACCTTAACGA AACATGTTGA TCCAGAAATT TTAGGTGGGG TTATTGTCCA TGTTGATAAT
AAGACATTAG ATGGTAGTCT CAGCTCAAAG ATTAAGCAAA TTCGTCGTTT ACTAGTTAGA
TAA
|
|---|
| Protein sequence | MSLDKKTVAD RYAKALFELV DADNELDQTY QELIALRQVF EDNEGLDAAL AGVQLSLDEK
KSLIKDLQQG ASKYVANLIQ MVFDYGRIDC MVAIIDEFER RYDRKMKRMH ADVTTAIQLD
KQQEDQLKAN LAKRFGANEV TLTKHVDPEI LGGVIVHVDN KTLDGSLSSK IKQIRRLLVR
|
|---|
| |