| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0431 |
|---|
| Symbol | |
|---|
| ID | 5189556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 482762 |
|---|
| End bp | 484699 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590237 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_001271037 |
|---|
| Protein GI | 148543667 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000145431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CAAACATTCA GCGATTTTGG ATTTCATTTG TATTATCAAT TCCGATGTTA
ATACAAATGC TTGCGATGCC TTTTCACTGG ATGATGCCAG CCTATAATTG GATAGCATTA
ATTACTACCA CTATTATTAT GGCAATTTCA GCATTTCCAT ATTGGAAAAG TGCGATCGCT
GCATTTAAAA AACATAGTGC AAATATGAAT ACCCTAGTCG CCACAGGAAC AGCTGTCGCT
TATTTTTATA GTATTTTTGC GATGATAACT GATAGGGCGG TTTATTTTGA AAGTGCTGCT
TTTGTTACTG TCTTTGTTTT ACTGGGGGAT GCGATGGAAG AGAAAATGCA TAACAATGCT
TCCAATGCTC TTGGTAAGTT GATGGGCCTT CAAGCAAAAG ATGCTGAAGT CTTAAAAGAT
GGTAAATTTG TCAAAGTACC ACTCGATCAA GTTCAAGTTG GCGACCTTAT TCGGGTCAAG
CCGGGTGAAA AAGTACCCGT AGACGGAACA ATTCTGGAAG GGGTAACTTC TCTGGATGAG
TCGATGGTTA CTGGTGAAAG TATGCCGGTA ATGAAAAAAG TTGGCGATAC TGTTGTTGGT
TCAACAATTA ATAATAATGG GACGATTACT TTTAAAGCCA CAAAGGTTGG AGCGGATACA
ATGCTTGCCC AAATTGTTGA CCTAGTAAAA AAAGCGCAAA CCAGTCATGC TCCTATCCAG
AACTTAACAG ATAAGATTTC AAATGTGTTT GTCCCAGCAG TAATGATTAT TGCTATTTTG
ACATTTATGA TTTGGTATTC CTTTGTTGGC GCAACATTTG TTCAAGCATT ATTATTTGCT
GTTTCAGTAA TTGTCATTGC TTGTCCGTGC GCATTAGGTT TAGCAACTCC AACAGCATTA
ATGGTTGGTA CTGCAAGAAG TGCTAAGATG GGTGTCCTTA TTAAGAATGG TGAAGTCCTT
CAAGAAGTAA GTAATATTGA TACTGTTGTG TTTGATAAAA CAGGGACAAT TACGGTCGGC
AAACCAGTTG TAACTGATAT TGTTGGCGAT GCTAAAAAAG TATTAACAAT CGCTGCTAGT
CTTGAGGAAT CGTCTGAGCA CCCGTTAGCA TCTGCAATTC TTCAAAAGGC AAAAAATAAA
GAGATCTCAC CAGTAAAGGT AGATAAATTT GAAGCAATTG AAGGTAAGGG TGTGCGTGCA
GATTATAATG GACAAGTAGC ATTTGTTGGT AGCAATCGGC TTTTGGTTGA TGTAAATATT
TCCCGGGAAA TGGCATCACG TGCGGAAAAA TTACAGAACG AAGCTAAAAC AGTTGTTTAT
GTTGGTCTTG ATGGGGAAAT AATCGGCTTA GTTGCCATTC AAGATGTTCC GAAGTCGAGT
TCAAAAGATG CAATTGCGGA GCTAAAAGCA CGTGGATTAA TGACTGTGAT GTTAACTGGG
GATAACAAAC GGGTAGCTCA AGCAATAGCT GATGAAGTTG GTATCGATAG GGTAATTGCT
GAAGTAATGC CGAATGATAA GGCTCAACAA ATCAAAGAAC TTCAGGACAA GGGTAAAAAG
GTTGCTTTTG TTGGTGATGG AATTAATGAT GCCCCTGCTT TGTCGACAGC TGATGTTGGA
ATTGCAATGG GATCTGGAAC TGATATCGCA ATTGACTCTG GTGGAATCGT TCTCGTTCAA
AACGATTTGC GAGGAGTTGT CCGGGCACTT GATATTTCTA AGAAGACCTT TAACCGAATT
AAATTAAATC TCTTCTGGGC GCTCATTTAC AATGTCATTG GTATTCCAAT CGCTGCAGGG
CTATTTGCAT TTATGGGCTT TACTCTTAGT CCGGAGCTTG CCGGCCTAGC AATGGCCTTT
AGTTCTGTTT CTGTTGTTAG TTCTTCTCTG CTGTTAAATA AAGCTAAGAT TGCGGGAGAG
CATGTTGTTC AAGCTTAA
|
|---|
| Protein sequence | MKLTNIQRFW ISFVLSIPML IQMLAMPFHW MMPAYNWIAL ITTTIIMAIS AFPYWKSAIA
AFKKHSANMN TLVATGTAVA YFYSIFAMIT DRAVYFESAA FVTVFVLLGD AMEEKMHNNA
SNALGKLMGL QAKDAEVLKD GKFVKVPLDQ VQVGDLIRVK PGEKVPVDGT ILEGVTSLDE
SMVTGESMPV MKKVGDTVVG STINNNGTIT FKATKVGADT MLAQIVDLVK KAQTSHAPIQ
NLTDKISNVF VPAVMIIAIL TFMIWYSFVG ATFVQALLFA VSVIVIACPC ALGLATPTAL
MVGTARSAKM GVLIKNGEVL QEVSNIDTVV FDKTGTITVG KPVVTDIVGD AKKVLTIAAS
LEESSEHPLA SAILQKAKNK EISPVKVDKF EAIEGKGVRA DYNGQVAFVG SNRLLVDVNI
SREMASRAEK LQNEAKTVVY VGLDGEIIGL VAIQDVPKSS SKDAIAELKA RGLMTVMLTG
DNKRVAQAIA DEVGIDRVIA EVMPNDKAQQ IKELQDKGKK VAFVGDGIND APALSTADVG
IAMGSGTDIA IDSGGIVLVQ NDLRGVVRAL DISKKTFNRI KLNLFWALIY NVIGIPIAAG
LFAFMGFTLS PELAGLAMAF SSVSVVSSSL LLNKAKIAGE HVVQA
|
|---|
| |