| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0410 |
|---|
| Symbol | |
|---|
| ID | 5188772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 462602 |
|---|
| End bp | 464422 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640590215 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001271016 |
|---|
| Protein GI | 148543646 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000145475 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TTGTTGGAGT TACAGGAACT GACAAGAGTT TGTCAATTCT AATTGATGGA
TTAAAGCGGC TTGAATATCG TGGATATGAC TCTGCAGGAG TTTACGTTAA TGATCAACAA
GGACATGATT ACCTTGTAAA GCGGCCAGGT CGGATTGCTA ATCTAGAAGC GGCCCTTGGA
GAAGAAGTTC ATGGTTTAGC CGGTATTGGT CATACCCGGT GGGCTACTCA TGGTGAACCA
AACGAAGCCA ATGCTCACCC TCAATACTCT CAAGACGAAC GGTTCTACTT AGTTCATAAC
GGTGTAATTG AAAATTATGC TGATTTAAAG AAAGAATACT TATCTGACAT TAACTTTGTT
AGTCAAACTG ATACAGAAGT AATTGTTCAA TTAGTTGATA AATTTGTAGT TGAATCTGGA
ATGTCAACAG AAGCAGCCCT CCTTAAGGTT CTTCGTTTAA TCAGCCCAGA TTCTTCATAT
GCATTTGTAT TGATGGATAA AGAACAACCA GATACATTAT TTGTTGCTAA AAATAAGAGT
CCATTACTAG TCGGTATTGC TGATGGTTAC AACATGGTTG GTTCTGATGC AATGTCAATG
ATTAAAGAAA CTAATACCTT TATGGAAATC GGTGACCACG AGTTGGTAAT CGTTAAGCCA
GATCACGTTA CTGTTAAAGA CTTTGATGGT AATGAGATTG ATCGGCCAAC ATTTAAGGTT
GATATGGATG CTAATGCCGC AGATAAAGGT GCGTACCCAT ACTACATGTT AAAGGAAATT
GACGAGCAAC CAGCTGTTAT GCGGAAGTTA GTTCAAGAAT ACTTTGGCGA CAATGATATA
GCACAAATTA ATGAAGAGAT GTTAAAAGAT ATGGCAAATG CCGACCATCT TTACATCGTT
GGTGCCGGTA CAAGTTATCA TGCCGGTTTA GTAGGTGCGC GTATTTTCGA AAAACTTTGT
GGAATTCCTA CATCTGTTCA TATTTCATCA GAATTTGCTT ATGAACAACC ACTTCTTTCT
AAGAAGCCAT TCTTTATCTT CTTAAGTCAA AGTGGGGAAA CTGCTGATAG TCGTGAAGTG
CTTGTTAATG TTAATAAGCA TAATTGGCCA AGTTTAACAA TTACGAATGT TGATAAGTCA
ACGCTTTCTC GTGAAGCAAC TTACACTGAA TTACTTTACG CTGGTCCAGA AATTGCCGTA
GCTTCAACAA AGGCTTACAC TGCCCAAATT GCTGTCGAAG CTATTCTTGC TCAAGCATTG
GGTGTCTACA TGGATAAGCA AGCAGCTAAA GACTTTGACG TTAAGCACCA ATTAGGATTA
GTTGCTAATG GTATGCAATC AATTACTGAT AGCAAGAAGA AAGTAGAAGA AATTGCTTCT
CGTTATCTCT CTAAATCTCC AAGCGCCTTC TACATTGGCC GGGGAATGGA TTGGTCAGTA
TCACTTGAAG CTGCTTTGAA GTTAAAGGAA ATTTCATACG TTCAAGCGGA AGGTTTTGCA
TCTGGTGAAT TAAAGCATGG AACAATTGCT TTAATTGAAG ATCAAACTCC AGTGATTGGG
ATCATTACCC AAGATCGGAC TGCTGGTTTA ACACGGAGTA ATCTTGAAGA AACACAAGCT
CGTGGGGCCA ATGCAATTAC AATTGTTTCA CGGCATCTTG CAAAAGAAGA CGATACATTC
GTTCTTCCCG ATGTCGATGA AGTTTTGACG CCACTTCTTA GCGTAATTCC AGCACAATTG
TTGGCTTACT ACACTAGTCT TGGTAAGGGA CTTGATGTTG ATAAGCCACG TAACCTCGCA
AAGTCTGTTA CAGTTCAATA A
|
|---|
| Protein sequence | MCGIVGVTGT DKSLSILIDG LKRLEYRGYD SAGVYVNDQQ GHDYLVKRPG RIANLEAALG
EEVHGLAGIG HTRWATHGEP NEANAHPQYS QDERFYLVHN GVIENYADLK KEYLSDINFV
SQTDTEVIVQ LVDKFVVESG MSTEAALLKV LRLISPDSSY AFVLMDKEQP DTLFVAKNKS
PLLVGIADGY NMVGSDAMSM IKETNTFMEI GDHELVIVKP DHVTVKDFDG NEIDRPTFKV
DMDANAADKG AYPYYMLKEI DEQPAVMRKL VQEYFGDNDI AQINEEMLKD MANADHLYIV
GAGTSYHAGL VGARIFEKLC GIPTSVHISS EFAYEQPLLS KKPFFIFLSQ SGETADSREV
LVNVNKHNWP SLTITNVDKS TLSREATYTE LLYAGPEIAV ASTKAYTAQI AVEAILAQAL
GVYMDKQAAK DFDVKHQLGL VANGMQSITD SKKKVEEIAS RYLSKSPSAF YIGRGMDWSV
SLEAALKLKE ISYVQAEGFA SGELKHGTIA LIEDQTPVIG IITQDRTAGL TRSNLEETQA
RGANAITIVS RHLAKEDDTF VLPDVDEVLT PLLSVIPAQL LAYYTSLGKG LDVDKPRNLA
KSVTVQ
|
|---|
| |