Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0401 |
Symbol | |
ID | 5189884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 454085 |
End bp | 454507 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640590206 |
Product | hypothetical protein |
Protein accession | YP_001271007 |
Protein GI | 148543637 |
COG category | [S] Function unknown |
COG ID | [COG2461] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000776425 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA TTAATCTTAA AGGTGGAAAA CTAAGTATTG AACAACTTAA TACTATTTTT GAAACCATCC CCGTAGAATT CGATTTCGTT GATGAAAATG ACATCATTCG CTGGTCATCA GCCAATCGGC ATCGTTTATT CAAACGAACT GATGCAGATC TAGGTAAACA TGTGCTTGAG GTTCATCCCG GGCATAGTCA AAACCATGTT AAACAAGTCC TTCATGATAT GCATAGCGGA GACCGCGATT CAATTAGCAT TATGATCAAG CATCATGGTC AACCTGTAAA TATTGCCTTT TACGCCTTAC GTGATGATCA AAATAAATAC CTTGGATGTG TAGAGGTAAC GCAAGACGTT AGTAAACAGC AAGCAAAGGG ATCCTTTTGG CGAAACATTA TGCAAGTACT ACATAAAAAA TAA
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Protein sequence | MTDINLKGGK LSIEQLNTIF ETIPVEFDFV DENDIIRWSS ANRHRLFKRT DADLGKHVLE VHPGHSQNHV KQVLHDMHSG DRDSISIMIK HHGQPVNIAF YALRDDQNKY LGCVEVTQDV SKQQAKGSFW RNIMQVLHKK
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