Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0397 |
Symbol | |
ID | 5189688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 451241 |
End bp | 451930 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590202 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001271003 |
Protein GI | 148543633 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.359974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAAT TAATTCATAA CGACTGGTGG GAAGTTTTAA AGCCCCAGTT TGAAAGTGCG TATTATGCGC AATTGCATAA TTTCCTAAAA GAAGAATATA CCCATCAAAC GATCTATCCA GAAATGCATC ATATTTTTGA AGCATTTGAA TGGACTCCTT TTAGTAAGGT TAAAGTTGTT ATCCTTGGTC AAGATCCTTA TCATGGACCA AACCAAGCTC ATGGGTGTAG TTTTTCAGTA CTGCCTGGGG TACCGGTCCC GCCTTCATTA CAGAATATTT ACAAAGAATT GCAAAGTGAT TTAGGTTGTA CACCGGTAAA TCACGGCTAT TTGAAGAAAT GGGCTGATCA AGGTGTCCTG TTGTTAAATT CGGTTTTGAC AGTACGAGCA GGGCAAGCAT ATTCTCACCG TGGACATGGC TGGGAGCAAT TAACAGATGC GGCGATTCAT GCTTTATCTG AACGTCCTAA ACCAGTGGTG TTCATCTTGT GGGGACGAGC TGCTCGAAAT AAGAAACAGT TAATTAATAC GAAGACAAAT ATCGTTCTTG AATCAGCTCA CCCGAGTCCA TTATCTGCTA ACCGTGGATT CTTTGGTTCT CGACCATTTT CTAAAACAAA CGAAGCACTT CAGGCAATGG GAGAACAGCC AATTGATTGG CAACTGCCTG CCGAACCAAA TTATCGTTAA
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Protein sequence | MKQLIHNDWW EVLKPQFESA YYAQLHNFLK EEYTHQTIYP EMHHIFEAFE WTPFSKVKVV ILGQDPYHGP NQAHGCSFSV LPGVPVPPSL QNIYKELQSD LGCTPVNHGY LKKWADQGVL LLNSVLTVRA GQAYSHRGHG WEQLTDAAIH ALSERPKPVV FILWGRAARN KKQLINTKTN IVLESAHPSP LSANRGFFGS RPFSKTNEAL QAMGEQPIDW QLPAEPNYR
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