| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0354 |
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| Symbol | groEL |
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| ID | 5189364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 401807 |
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| End bp | 403435 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640590159 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001270960 |
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| Protein GI | 148543590 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000178362 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG AAATTAAGTT TTCTGAAGAT GCACGGAGCG CTATGCTCAG TGGTGTTGAT
AAATTAGCTG ATACTGTTAA GACAACGATG GGTCCAAAGG GACGGAATGT TGTTTTGGAA
CAAAGCTATG GCACACCAAC TATTACTAAT GATGGTGTAA CTATTGCTAA GAGCATTGAA
CTTGAAAACC AATTTGAAAA TATGGGTGCA AAGTTAGTAG CCGAAGTTGC TTCAAAGACC
AACGATATTG CCGGTGATGG TACTACAACT GCTACTGTTT TAACTCAAGC AATTGTTAAT
GCTGGTATGA AGAACGTTAC CTCTGGTGCA AACCCAGTTG GTATTCGTCG TGGTATTGAC
AAGGCTACCG AAGTTGCTGT TGAAGCTTTG AAGAAGATGT CACACGATGT AAAGACAAAG
GATGATATCG AACAAATCGC TTCTATTTCA GCTGCTAATC CAGAAGTTGG TAAGTTAATT
GCTGATGCAA TGGAAAAGGT TGGCCATGAT GGTGTAATTA CTATCGAAGA TTCTCGTGGT
GTTGACACTA GCGTTGATGT TGTTGAAGGA ATGAGCTTTG ATCGTGGTTA CATGTCACAA
TACATGGTAA CTGATAACGA CAAGATGGAA GCAGACCTTG ACAACCCATA TATTTTGATT
ACTGACAAGA AGATTAGTAA TATCCAAGAC ATTTTGCCAT TGCTTCAATC AGTTGTTCAA
GAAGGCCGTG CTCTCTTGAT CATTGCTGAT GACATTACTG GTGAAGCATT ACCAACTCTT
GTATTGAACA AGATTCGTGG TACCTTTAAT GTTGTTTCTG TTAAGGCTCC TGGCTTTGGT
GACCGTCGTA AGGCTCAACT TCAAGATATT GCTGTTTTGA CTGGTGGTAC AGTTATTTCT
GACGACCTTG GGATGAGTCT AAAGGACGCT ACTGTTGATC AATTAGGTCA AGCAAACAAG
GTTACAGTTA CAAAGGATAC TACTACTATC GTTGATGGTG CTGGTTCAAA GGAAGCTATC
CAAGAACGTG TTGACCAAAT TAAGCAAGAA ATTGCTAAGT CAACTTCCGA CTTCGATAAG
GAAAAGCTTC AAGAACGTCT TGCAAAGCTT TCAGGTGGGG TTGCCGTTGT TAAGGTTGGT
GCCGCAACTG AAACTGAATT GAAGGAAAAG AAGTACCGGA TTGAAGATGC CTTGAACGCT
ACTCGTGCTG CTGTTCAAGA AGGATTTGTT CCTGGTGGTG GAACTGCTTT AATTAACGTA
ATTCCTGCTC TTGACAAGAT TGAAGCCGAT GGTGATGAAT TAACTGGTAT CAATATTGTT
AAGGCTGCCC TTGAAGCACC AGTTCGTCAA ATTGCTGAAA ACGCTGGTGT TGAAGGCTCT
GTTATTGTTA ATGAATTAAA GAATGAAAAA GAAGGCATTG GTTACAACGC TGCAGATGGC
AAGTTTGAAG ATATGATCAA GGCTGGTATT GTTGACCCAA CAATGGTTAC CCGGTCTGCT
CTTCAAAACG CTGCTTCCGT ATCAGCATTG CTTCTTACTA CTGAAGCGGT TGTTGCTGAT
AAGCCAGATC CAAATGCTAA TAACCAAGCT CCTGCTGCTC CACAAGGCGG CATGGGCGGT
ATGATGTAA
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| Protein sequence | MAKEIKFSED ARSAMLSGVD KLADTVKTTM GPKGRNVVLE QSYGTPTITN DGVTIAKSIE
LENQFENMGA KLVAEVASKT NDIAGDGTTT ATVLTQAIVN AGMKNVTSGA NPVGIRRGID
KATEVAVEAL KKMSHDVKTK DDIEQIASIS AANPEVGKLI ADAMEKVGHD GVITIEDSRG
VDTSVDVVEG MSFDRGYMSQ YMVTDNDKME ADLDNPYILI TDKKISNIQD ILPLLQSVVQ
EGRALLIIAD DITGEALPTL VLNKIRGTFN VVSVKAPGFG DRRKAQLQDI AVLTGGTVIS
DDLGMSLKDA TVDQLGQANK VTVTKDTTTI VDGAGSKEAI QERVDQIKQE IAKSTSDFDK
EKLQERLAKL SGGVAVVKVG AATETELKEK KYRIEDALNA TRAAVQEGFV PGGGTALINV
IPALDKIEAD GDELTGINIV KAALEAPVRQ IAENAGVEGS VIVNELKNEK EGIGYNAADG
KFEDMIKAGI VDPTMVTRSA LQNAASVSAL LLTTEAVVAD KPDPNANNQA PAAPQGGMGG
MM
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