Gene Lreu_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0343 
Symbol 
ID5189931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp389010 
End bp390041 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content43% 
IMG OID640590148 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_001270949 
Protein GI148543579 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC GCACATTAAC CTTAGCGTTT GAATCAAGCT GTGATGAAAC AAGTGTTGCC 
GTAATTGAAA ATGGAACTAA AATCCTTTCT AATATCGTTG CAACGCAAAT CGATAGTCAT 
CAGCGCTTTG GTGGAGTAGT ACCAGAAGTA GCTAGTCGCC ATCATATTGA ACAAATTACC 
AAGTGTACAA ATGAAGCTTT AGAGCAAGCA GATGTAGACT ATAATGACCT AGATGCTGTG 
GCAGTAACAT ACGGTCCGGG ATTAGTCGGG TCATTATTAA TTGGTGTGAC GGCAGCGAAG 
GCCATCGCAT GGGCGCATAA TCTTCCGTTA GTGCCGGTTA ACCACATGGC AGGCCATATC 
TATGCCGCAC GCTATGTTGG AGAATTCCAA TATCCACAAA TGGCATTGTT AGTTTCCGGT 
GGACATACGG AATTAGTTTA CATGCCATCT GAACATGAAT ACCAAATTAT TGGTGAAACA 
CGTGATGATG CTGCCGGTGA AGCTTATGAT AAAATCGGTC GCGTGTTGGG AGTCAATTAC 
CCGGCAGGAA AAACGATTGA TGAATGGGCA GCTAAGGGTA AAGATACTTT TAATTTTCCA 
CGAGCAATGG AAAAAGAAGA TAATTATGAC TTTAGCTTTA GCGGGTTGAA GAGTGCCTTC 
ATCAATACTG TTCATAATGC AGACCAGCGT GGGGAAAAAT TAGATAAATA TGATCTTGCA 
GCCAGTTTCC AACAAAGTGT CATTGACGTG CTTGCTGAAA AAACGATGCG GGCGTTAGAT 
GATTACCCAG TGAAGCAACT GATTTTAGCT GGTGGGGTCG CTGCAAATCA TGGCCTCCGT 
GCTCGTTTAG ATCATGATAT GAAGGAATTT CATCCTGATG TACCTATGCT GCAAGCACCA 
TTGAAATTAT GTGGTGACAA TGCTGCAATG ATTGGGGCGG CTGGTTATGT TAACTACAAG 
CATGGTGACC GTGCAGGCTT AGATTTGAAT GCAGTACCGG GATTGATGTT TGATCGAATT 
CAGAGTAAAT AA
 
Protein sequence
MTERTLTLAF ESSCDETSVA VIENGTKILS NIVATQIDSH QRFGGVVPEV ASRHHIEQIT 
KCTNEALEQA DVDYNDLDAV AVTYGPGLVG SLLIGVTAAK AIAWAHNLPL VPVNHMAGHI 
YAARYVGEFQ YPQMALLVSG GHTELVYMPS EHEYQIIGET RDDAAGEAYD KIGRVLGVNY 
PAGKTIDEWA AKGKDTFNFP RAMEKEDNYD FSFSGLKSAF INTVHNADQR GEKLDKYDLA 
ASFQQSVIDV LAEKTMRALD DYPVKQLILA GGVAANHGLR ARLDHDMKEF HPDVPMLQAP 
LKLCGDNAAM IGAAGYVNYK HGDRAGLDLN AVPGLMFDRI QSK