Gene Lreu_0330 details

Gene Information

• Locus tag: Lreu_0330
• Symbol: tmk
• ID: 5189072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 376070
• End bp: 376711
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640590136
• Product: thymidylate kinase
• Protein accession: YP_001270937
• Protein GI: 148543567
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGTA AATTTATATC ATTTGAAGGA CCAGATGGCG CGGGTAAGAC AAGTGTAATC 
CAACAGATCC AACTGGAATT GGAAGATCAG CTTGGCACAG AAAAAGTTAT GTATACTCGT 
GAACCTGGTG GTAATAAGAT CTCTGAGCAA ATTCGCCAGG TACTGTTTGA TGGTCAAAAT 
ACCGATATGG ATGGGCGGAC AGAAGCATTG CTTTTTGCTG CTGCTCGTCG GCAACACATT 
GTTTCAGAAA TAATTCCGGG GCTGAAAGCA GGCAAAGTTA TTCTGTGTGA TCGATTTGTA 
GATAGTTCCA TTGCTTATCA GGGAGCTGGT CGGGGCCTTG GAGAAAAAGA AATTTGGCAA 
ATTAATCAGT TTGCGATTGA TGGGCTAATG CCGGCGTTGA CAATTTATCT TGATATTGAA 
TCAGAAATTG GCTTAAAACG GATTGCTGAG CATCGTTCCA ATCAAGTTAA TCGATTAGAT 
GAAGAAAAAC TTGAATTTCA TCGAACTGTT CGTCAATCTT ATTTAAAACT CTACCAGAAT 
TATCCAGAAC GAATAGAGTT GATTGATGCA AGCCAGCCAT TGGAAAAAGT GATTGAGGAC 
GTAAAAGCAA CAATTCATGA CCGGTTTTCA GATTTGTTTT AA 

 

Protein sequence

MDGKFISFEG PDGAGKTSVI QQIQLELEDQ LGTEKVMYTR EPGGNKISEQ IRQVLFDGQN 
TDMDGRTEAL LFAAARRQHI VSEIIPGLKA GKVILCDRFV DSSIAYQGAG RGLGEKEIWQ 
INQFAIDGLM PALTIYLDIE SEIGLKRIAE HRSNQVNRLD EEKLEFHRTV RQSYLKLYQN 
YPERIELIDA SQPLEKVIED VKATIHDRFS DLF