Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0325 |
Symbol | |
ID | 5189613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 372252 |
End bp | 372764 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590130 |
Product | tRNA-adenosine deaminase |
Protein accession | YP_001270932 |
Protein GI | 148543562 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00296157 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA ACAATTCATC ATTATCTGAA CAACAAAAGT TTATGAAGAT GGCGATTGCA GAAGCAAAAC AAGCCAGAAT TTTAGATGAA GTACCAATTG GTGCGATTGT TGTCCACGAT GGACAGGTAA TTGGACGTGG TCATAATATG CGTGAAAAGT TTCAAGATGT TACCTATCAC GCAGAAATGC TTGCAATTAT GGAAGCATGC ACGAATTTAG GGAGTTGGCG CTTAGAAGAT TGCGACTTGT ATGTTACGTT AGAACCGTGC ATCATGTGTA GCGGTGCCAT TATCAATGCA CGGATAAAAA ATGTTTATTA TGGTGCCGCT GATCCGAAAG CAGGGGCAGT TGATAGCTTA TATCATTTAC TAAGTGATTC ACGTTTAAAT CATCAAGTCA ATGTTCATTC TGGTATTTTA GGGGATGAGT GTAGCCAAAT GTTAAAAAAC TTTTTCCGTG AAATTCGCCG TCGTCGGAAA GAGGCTCGAA GAAAAAATAA GACTAACCTC TAG
|
Protein sequence | MKKNNSSLSE QQKFMKMAIA EAKQARILDE VPIGAIVVHD GQVIGRGHNM REKFQDVTYH AEMLAIMEAC TNLGSWRLED CDLYVTLEPC IMCSGAIINA RIKNVYYGAA DPKAGAVDSL YHLLSDSRLN HQVNVHSGIL GDECSQMLKN FFREIRRRRK EARRKNKTNL
|
| |