Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0305 |
Symbol | |
ID | 5189699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 353491 |
End bp | 354240 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590110 |
Product | RNA methyltransferase |
Protein accession | YP_001270912 |
Protein GI | 148543542 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000127836 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG AGAATACAGA TTTTATTATT GGTCGGCATC CGGCTGTGAT GGCACTAAAA TCTGACCAAG AAATTAATAA GGTTTTTATT CAGTCGGGGT TAAAGGCCGA TGCTATTTCC CAGATTGTTA AACTAGCAAA GGAACGTCAC TTAGTAGTGT CAAATGTTCC TAAGAATAAA TTGGACTTGA TGACTGACCG GCAAAATCAC CAGGGGGTTG TTTTAGCTGT AGCTGCCTAC CAATATGCAA CTATTGATGA CCTCTTTGAT AATGCAGCTA AGCATGACGA AGATCCATTT TTCCTTATTC TTGATGAACT AGAGGATCCG CATAATTTGG GTTCAATCAT GCGAACAGCT GATGCCGCTG GTGTTCATGG TATTATTATT CCACGCCGGC GAGCAGTAGG ATTGACTTCA GTGGTTGCCA AAACATCCAC GGGAGCAATT GAACACGTTC CAGTTGCCCG AGTAACAAAC CTGGTTCAAA CCGCGAAAGA ATTGCAGGAA CGAGGCGTTT GGCTATTCGG TACTGATATG AAAGGAAAAG ATTACCGAAC ATGGGATGCG CATGGTGCCG TCGCTTTGGT TATCGGCAAT GAAGGTAAAG GAATTTCATC CTTGCTAAAG AAAACTTGTG ATGAAATGCT GACAATTCCA ATGGTTGGGC ATGTTCAAAG TTTAAATGCG AGTGTGGCGG CAAGTTTATT GATCTACCAA GGCTTCAACT CTCGTCATCC TTTAAAATAA
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Protein sequence | MKNENTDFII GRHPAVMALK SDQEINKVFI QSGLKADAIS QIVKLAKERH LVVSNVPKNK LDLMTDRQNH QGVVLAVAAY QYATIDDLFD NAAKHDEDPF FLILDELEDP HNLGSIMRTA DAAGVHGIII PRRRAVGLTS VVAKTSTGAI EHVPVARVTN LVQTAKELQE RGVWLFGTDM KGKDYRTWDA HGAVALVIGN EGKGISSLLK KTCDEMLTIP MVGHVQSLNA SVAASLLIYQ GFNSRHPLK
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