Gene Lreu_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0305 
Symbol 
ID5189699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp353491 
End bp354240 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID640590110 
ProductRNA methyltransferase 
Protein accessionYP_001270912 
Protein GI148543542 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000127836 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG AGAATACAGA TTTTATTATT GGTCGGCATC CGGCTGTGAT GGCACTAAAA 
TCTGACCAAG AAATTAATAA GGTTTTTATT CAGTCGGGGT TAAAGGCCGA TGCTATTTCC
CAGATTGTTA AACTAGCAAA GGAACGTCAC TTAGTAGTGT CAAATGTTCC TAAGAATAAA
TTGGACTTGA TGACTGACCG GCAAAATCAC CAGGGGGTTG TTTTAGCTGT AGCTGCCTAC
CAATATGCAA CTATTGATGA CCTCTTTGAT AATGCAGCTA AGCATGACGA AGATCCATTT
TTCCTTATTC TTGATGAACT AGAGGATCCG CATAATTTGG GTTCAATCAT GCGAACAGCT
GATGCCGCTG GTGTTCATGG TATTATTATT CCACGCCGGC GAGCAGTAGG ATTGACTTCA
GTGGTTGCCA AAACATCCAC GGGAGCAATT GAACACGTTC CAGTTGCCCG AGTAACAAAC
CTGGTTCAAA CCGCGAAAGA ATTGCAGGAA CGAGGCGTTT GGCTATTCGG TACTGATATG
AAAGGAAAAG ATTACCGAAC ATGGGATGCG CATGGTGCCG TCGCTTTGGT TATCGGCAAT
GAAGGTAAAG GAATTTCATC CTTGCTAAAG AAAACTTGTG ATGAAATGCT GACAATTCCA
ATGGTTGGGC ATGTTCAAAG TTTAAATGCG AGTGTGGCGG CAAGTTTATT GATCTACCAA
GGCTTCAACT CTCGTCATCC TTTAAAATAA
 
Protein sequence
MKNENTDFII GRHPAVMALK SDQEINKVFI QSGLKADAIS QIVKLAKERH LVVSNVPKNK 
LDLMTDRQNH QGVVLAVAAY QYATIDDLFD NAAKHDEDPF FLILDELEDP HNLGSIMRTA
DAAGVHGIII PRRRAVGLTS VVAKTSTGAI EHVPVARVTN LVQTAKELQE RGVWLFGTDM
KGKDYRTWDA HGAVALVIGN EGKGISSLLK KTCDEMLTIP MVGHVQSLNA SVAASLLIYQ
GFNSRHPLK