| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0293 |
|---|
| Symbol | |
|---|
| ID | 5188817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 342146 |
|---|
| End bp | 343288 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590098 |
|---|
| Product | cystathionine gamma-lyase |
|---|
| Protein accession | YP_001270900 |
|---|
| Protein GI | 148543530 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000375953 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA ACACACAATT AATTCATGGC GGTAATAGTG AGGATCCAAC CACTGGTGCT
GTCTCAACAC CGATTTACCG TTCATCAACA TTCCATCAAC ACGTTCTTGG CGGTGAACCT
AAATGGGAAT ATTCTCGAAC AGGAAATCCA ACACGTGCAT CTCTTGAAAA ATTAATCGCA
GAGCTTGAAC ATGGGACAGC CGGCTTTGCA TTTGCTTCCG GATCTGCTGC TATTCATGCT
ACTTTTTCTT TATTCTCTCA AGGCGATCAT TTTGTAGTTG GTAGTGATGT ATACGGGGGA
ACATTCCGGT TAATCAATAA GGTATTAAAA CGCTTTGGCC TTGAATTTAC TGTTGTTGAC
ATGCAAGACC TTGAAGCAGT CGAAAATGCA ATTCAAGATA ATACCGTTGC AGTTTATTTT
GAAACACCAA CTAATCCGCT CTTGCAAATC GCTGATATTA AAGCAATTGC TGATATCGCA
AAAAAGCATG GAATAAAGAC AATTGTTGAT AATACCTTTG CTACTCCTTA TAACCAACAA
CCGTTAACTC TTGGGGCAGA TATTGTTGTT CACTCCGCAA CAAAATATTT AGGCGGCCAT
AGTGATGTTG TTGCCGGATT AGCAGTTACT AACGATGATG AAATTGCTGA ACAATTAGCA
TTCCTGCAAA ACTCAATCGG TAGTACGCTT GGTCCTGATG ATAGTTGGCT ACTACAACGA
GGGATGAAAA CTCTCGGTGC CCGGATGCGC GTTCACCAAG AAAATGCGAA TGAAGTTATT
AACTTCCTCC AAAATGATGA CCATATTGGG AAAATTTATT ATCCAGGCTT AAAAGATTTT
CCTGGTCATG AGGTTGCGGC TAAGCAAATG CGTAACTTTG GAGCAATGAT CTCCTTTGAA
CTTAAGGATG GTTTAGATGC GAAGAAGTTT GTTGAAAGTC TACAATTGAT TGATCTTGCC
GAAAGCTTAG GGGGAATTGA AAGTTTGATT GAAGTTCCAG CTGTCATGAC CCATGGATCT
ATTCCCCGGG AAATAAGACT AGAGAACGGA ATTAAAGATG AGTTAATTCG TCTTTCAGTG
GGAATCGAGG ACCCTGAAGA TATTATTGCT GACTTGCAAC AAGCACTTAA AAAATTAGAC
TAA
|
|---|
| Protein sequence | MKFNTQLIHG GNSEDPTTGA VSTPIYRSST FHQHVLGGEP KWEYSRTGNP TRASLEKLIA
ELEHGTAGFA FASGSAAIHA TFSLFSQGDH FVVGSDVYGG TFRLINKVLK RFGLEFTVVD
MQDLEAVENA IQDNTVAVYF ETPTNPLLQI ADIKAIADIA KKHGIKTIVD NTFATPYNQQ
PLTLGADIVV HSATKYLGGH SDVVAGLAVT NDDEIAEQLA FLQNSIGSTL GPDDSWLLQR
GMKTLGARMR VHQENANEVI NFLQNDDHIG KIYYPGLKDF PGHEVAAKQM RNFGAMISFE
LKDGLDAKKF VESLQLIDLA ESLGGIESLI EVPAVMTHGS IPREIRLENG IKDELIRLSV
GIEDPEDIIA DLQQALKKLD
|
|---|
| |