Gene Lreu_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0283 
Symbol 
ID5188843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp329403 
End bp330104 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content40% 
IMG OID640590087 
ProductGntR family transcriptional regulator 
Protein accessionYP_001270890 
Protein GI148543520 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.696412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAC CTGTTTATAT TCAAATTCAC AATCAGTTAA GACAAAACAT TGAAGATGGT 
GAGTGGAAAG TTGGCGATAA AATTCCCGCT GAACGCGAAC TCGCTAATGA TTTTGGCGTC 
AGTCGAATGA CTTTGCGGCA AGCAATTCAA GCATTAGTTG ATGAAGGAAT TCTTGAACGA 
AGAGTTGGCT CTGGAACTTT TGTCGCTAAT CGCAAAGTCC AAGAAAAGAT GTCAGGAATA 
ACGAGCTTTA CTGAATTAAT GCACGCGACA GGGAAGAAAG CTGCTAGTAA GACAATTTCT 
TACCACTTGA CGATCCCTTC GCAAACAGAG GTTGAAAAGC TAAAGTTAGC CCCAGATGAA 
CAGGTTTTAC GAATGGAACG GGTTCGTTAT GGAAATGATG TGCCAATTTG TTATGAAATC 
GCAACCGTTC CTGCTAACCT CGTTCAAAAA TTTAGCAAAG AAGAAATTAC CACATCTTTT 
TATCGGACGT TAGAAAAAAA GGCGAACCTT TATCCTGGTC ATGCAACCCA GCATATTTCA 
GCAACGAAGG CGACGGAAAA GATTGCTAAT TACTTGCAGA TTAAACGTGG AGATGCGCTC 
TTGCGAATGA CCCAACTATC TTACTTGCAA GATGGTCGTC CTTTTGAATA TGTCCACACT 
CAATATGTTG GATCACGGTT TGAATTTGTC TTTGAAAAGT AA
 
Protein sequence
MSSPVYIQIH NQLRQNIEDG EWKVGDKIPA ERELANDFGV SRMTLRQAIQ ALVDEGILER 
RVGSGTFVAN RKVQEKMSGI TSFTELMHAT GKKAASKTIS YHLTIPSQTE VEKLKLAPDE 
QVLRMERVRY GNDVPICYEI ATVPANLVQK FSKEEITTSF YRTLEKKANL YPGHATQHIS 
ATKATEKIAN YLQIKRGDAL LRMTQLSYLQ DGRPFEYVHT QYVGSRFEFV FEK