| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0270 |
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| Symbol | |
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| ID | 5188917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 308433 |
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| End bp | 309434 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640590066 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001270877 |
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| Protein GI | 148543507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000135334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGGA AGATCGGTAA CGTTGAAATT CCTAATCAAG TTGTTGTTGC ACCAATGGCT
GGAGTAACCA ATTCCGCCTT TCGGGTTATC TGTAAAAGAT TTGGTGCTGG CTACGTTGTC
TGTGAAATGA TCTCAGACCG TGGCATTATG TACCATAATC AACGAACTTT AAATATGATG
GATGTCGACC CGGAAGAACA TCCGATGGGA ATTCAAATTT TCGGTGGAAC TAAAGAGACA
TTAGTTGAGG CTGCTAAGTA TGTGGATCAA CATACAGCAG CTGACGTGAT TGATATAAAT
ATGGGGTGTC CTGTTAATAA GGTTGTAAAA ACTGACGCGG GTGCACGATG GTTACTGGAT
CCTAATAAAG TCTATGAAAT GGTGTCATAT GTTACTGATG CTGTTAAGAA GCCAGTTACC
GTTAAGATGC GAACTGGTTG GGACGACAAG CATATTTTAG CTGTTGAAAA TGCTTTAGCA
GCTGAACGGG CAGGAGCTAG CGCGATTGCG ATGCATGGTC GAACTCGAAA ACAAATGTAT
ACGGGACAAG CAGATTGGAA TATACTAAAA GAAGTAGCGA GTCAATTGAA AATTCCGTTC
ATGGCTAATG GTGATGTGAA GACACCAGAA GATGCTAAGA AGATTCTTGA TATGACTGGC
GCAACTGCCG CAATGATCGG TCGGGCAGCG ATGGGTAACC CATGGATGCT AAAGCGGACT
GAACATTACT TAGCGACTGG TGAGCTGCTC CCAGAAGCAA CTCCAGAACA AAAGATTGAA
ATGGCTAAAG ATCACCTTAA TCGTTTAGTT GATTTAAAGG GTGAATATGT TGGTGTTCGT
GAGTTCCGGG GGTTATCGAC ATACTATATC AAGGGTATTC CGCGTGCTGC CCGGACTAAA
GTAGCGTTAG TCGAGGCAGA AACACTTGAT GAAATGAACG ATATTTTTGA CCGCTTTGCT
GAACAAACTG CAGAACGGGC TGCAAAAAGA CAGCAAGCCT AA
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| Protein sequence | MKWKIGNVEI PNQVVVAPMA GVTNSAFRVI CKRFGAGYVV CEMISDRGIM YHNQRTLNMM
DVDPEEHPMG IQIFGGTKET LVEAAKYVDQ HTAADVIDIN MGCPVNKVVK TDAGARWLLD
PNKVYEMVSY VTDAVKKPVT VKMRTGWDDK HILAVENALA AERAGASAIA MHGRTRKQMY
TGQADWNILK EVASQLKIPF MANGDVKTPE DAKKILDMTG ATAAMIGRAA MGNPWMLKRT
EHYLATGELL PEATPEQKIE MAKDHLNRLV DLKGEYVGVR EFRGLSTYYI KGIPRAARTK
VALVEAETLD EMNDIFDRFA EQTAERAAKR QQA
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