| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0267 |
|---|
| Symbol | |
|---|
| ID | 5189837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 304430 |
|---|
| End bp | 304972 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640590063 |
|---|
| Product | hypoxanthine phosphoribosyltransferase |
|---|
| Protein accession | YP_001270874 |
|---|
| Protein GI | 148543504 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG ATATTGAGCG TGTCTTATAT AGTGAAGAAA TGCTTGGCAA ACGAATGGAC
GAATTAGCAA CGGACTTAAC AAAAGATTAT AAGGATAAAC GGCCAATTAT CATTTCCGTT
CTAAGCGGGG CAGTTTTATT TACTGTTGAC ATGATTGAAC GGCTAGATAT TATGGCTCAA
ATCGACTTTA TTGATGTTTC TAGTTATTTT GGTGGATTAG GTTCGACTGG AAAAGTTAAA
CTTATCCATG ATTTAAAAAT AGACGTTAAA GACCGGCATG TTCTAATTAT GGAAGATATT
GTTGATACTG GTCGTACTTT GAAATACTTG ATGGACCTGT TAGCTGACCG GGGAGCAAAG
AGCATCAAGG TTTGTTCATT ATTAAATAAG CCAGAAGGTC GGAAAGTAGA TATCGAACCT
GACTATGTTG GCTTTACAGT TCCTAAAGAA TTCTTGGTTG GATATGGTCT GGACTACAAG
GGATTCTACC GAAATTTGCC ATATGTGGGA ATTTTGAAGC CATCTGTATA CCAAAATGAC
TAA
|
|---|
| Protein sequence | MNNDIERVLY SEEMLGKRMD ELATDLTKDY KDKRPIIISV LSGAVLFTVD MIERLDIMAQ
IDFIDVSSYF GGLGSTGKVK LIHDLKIDVK DRHVLIMEDI VDTGRTLKYL MDLLADRGAK
SIKVCSLLNK PEGRKVDIEP DYVGFTVPKE FLVGYGLDYK GFYRNLPYVG ILKPSVYQND
|
|---|
| |