Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0259 |
Symbol | |
ID | 5188851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 295775 |
End bp | 296566 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590055 |
Product | hydratase/decarboxylase |
Protein accession | YP_001270866 |
Protein GI | 148543496 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000347099 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TAAACGCACG ACAGGAAGAA TTTGCTAAGG CTCTTTTTGA AGCTTATGAC ACTAATACGC CATTAAACGA GGAAGAATGG AAAGATGTTG TTACTGATGA TGAAACCGCA TATGCAGTTC AAGATGCGGT AGTAAAGTTA AAAGGAAAGC CAACTGCAGG CTATAAAGTT TCGTTAACTA GTAAAGAAAC TCAAGACATG TTTGATGCTG ATTCACCATT GTACGGACAA CAAGTTGCTG AACGATTCCT CCAGTCACCA GCGGATGTTG ACTTGCAGAT GTTAAATGAA CCGTTATTAG AGGTTGAATT AACCTTCCGT GCAAAAGAAG ACTTGCAGCC TAGTGATACA TTAGAAGATT TATTTCATAA GGTAACTGTT GCGGGTGCCT TAGAATTGCC TGATGCACGT TTTGTCGACT GGTTTCCAGA TTTAGGAAAA TATAATGTAA TGGCTGATTG TGCTGTTGGT GGTCTTGTTG TATATGGTGA AGAACATGAT GCAGATAGTG TATTTGAAAA CGTTGACGAT GCTGCTAATG TTCATGCTGT TTTATTCAAA GATGGTGAGA AATTAAAAGA AGGGGTATCA TCAGAAGTTT TGGGCAATCC CTTTAAGTCT CTTCAATGGT TAGTGCAAAA ATTAGCTGAA CAAGGAAAAG CATTTACCAA GGGCCAAATG GTATCATCCG GAACATTTGT CTTACCACCT AAGCTCACTG CTGGTAAGTG GGAAGTTGAG TTTGATAGCG GTTTAGGAAA CGTTGTAGTT AATGCGAAAT AA
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Protein sequence | MTELNARQEE FAKALFEAYD TNTPLNEEEW KDVVTDDETA YAVQDAVVKL KGKPTAGYKV SLTSKETQDM FDADSPLYGQ QVAERFLQSP ADVDLQMLNE PLLEVELTFR AKEDLQPSDT LEDLFHKVTV AGALELPDAR FVDWFPDLGK YNVMADCAVG GLVVYGEEHD ADSVFENVDD AANVHAVLFK DGEKLKEGVS SEVLGNPFKS LQWLVQKLAE QGKAFTKGQM VSSGTFVLPP KLTAGKWEVE FDSGLGNVVV NAK
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