| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0258 |
|---|
| Symbol | |
|---|
| ID | 5188820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 294152 |
|---|
| End bp | 295390 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640590054 |
|---|
| Product | N-isopropylammelide isopropylaminohydrolase |
|---|
| Protein accession | YP_001270865 |
|---|
| Protein GI | 148543495 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000289876 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTAA AAAATGTCCA TGTTGATAAT CATGAAGAAG TAGTCGATGT TCGAATTCTC
AATGGAAAAT TTAGTGAGAT TAAGGCTAAC TTAGCGCCCC ATGATGGTGA AGAGGTTATT
GACGGTAAAG AAAATTTACT TTTGCCACCA TTTGTTGATT CTCATGTTCA CTTAGATGCT
ACGCTTACTG CTGGTCAGCC AGAATGGAAT GAAACCGGGA CTTTATTTGA TGGTATCCGG
ATTTGGAGTG AACGGAAACA AGATTTAACT AAGGAAGATG TTAAATCGCG TGCGAAAAAG
ACATTACTAA ATATGGTTGG GCATGGAATT CAACACGTAC GGAGCCATGT TGATGTGACT
GATCCTCATT TGATTGCTGC CCGTGCTCTC CTCGAATTGC GTGAAGAATT AAAAGACCAA
ATCGACTTGC AGTTGGTTGC TTTTCCACAA GAAGGCATTC TTAGCTATCC TCATGGACGT
GAATTAATGG AGCAGGCGGT CAAAGAAGGA TTAGATGTCG TTGGTGGTAT TCCCCATTTT
GAGTTTACAA CTGAATATGG GTGGCAATCT GTTCATTTCT TAATGGCCCT CGCAGATAAG
TACGATCGTT TAGTTGACGT CCACTGTGAT GAAATCGATG ACCCAGCTTC GCGTAACCTT
GAAGTTTTAG CGACCGAAGC TTATGAACGA GGGATGAAGG ACCGGGTCAC GGCAAGTCAT
ACGACAGCGA TGGGCTCATA TAATGATGCT TATACTTATA AATTATTCCG TCTATTAAAG
ATGAGTGATA TTAATTTTGT ATCTAATCCA TTAGTTAATG TTCACCTTGG CGGCCGTTTC
GATACTTACC CAAAGCGTCG CGGCGTTACT CGGATTAAGG AATTAACAGG AGCTGGGATT
AATGTTTCCT TTGGGGAAGA TGATATCCAA GATCCGTGGA ATCCTCTCGG CGATGGTAAC
ATGTTAGATG CAGTTACGAT GGGTGTTTAT ATTGCTCACT TGATGGGGTA TCACCAACTG
CAAGATGCCT TTAATTACGT AACCTATAAC GGTGCTAAGA CATTGCATAT TAGTGATAAT
TATGGAATTG AAGTAGGAAA ACCGGCAAAC TGTATCTTAT TGAATGCCCA CGATTTCTAT
AATGCTCTTA ATAAGCATGT TGAAGTTCTT TATAATATTC GTCATGGGAA AGTCCTTGCC
GAGACGAAAC CAGCTGAAAC CAAAGTTAAT ATCAAATAA
|
|---|
| Protein sequence | MLLKNVHVDN HEEVVDVRIL NGKFSEIKAN LAPHDGEEVI DGKENLLLPP FVDSHVHLDA
TLTAGQPEWN ETGTLFDGIR IWSERKQDLT KEDVKSRAKK TLLNMVGHGI QHVRSHVDVT
DPHLIAARAL LELREELKDQ IDLQLVAFPQ EGILSYPHGR ELMEQAVKEG LDVVGGIPHF
EFTTEYGWQS VHFLMALADK YDRLVDVHCD EIDDPASRNL EVLATEAYER GMKDRVTASH
TTAMGSYNDA YTYKLFRLLK MSDINFVSNP LVNVHLGGRF DTYPKRRGVT RIKELTGAGI
NVSFGEDDIQ DPWNPLGDGN MLDAVTMGVY IAHLMGYHQL QDAFNYVTYN GAKTLHISDN
YGIEVGKPAN CILLNAHDFY NALNKHVEVL YNIRHGKVLA ETKPAETKVN IK
|
|---|
| |