| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0248 |
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| Symbol | |
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| ID | 5189565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 284469 |
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| End bp | 285851 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640590044 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001270855 |
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| Protein GI | 148543485 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000485137 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACAAT CGCAGAAAAC AGAACAACAA GCTGACCGCT TGTCGAGGAT AGGTTTGGAA
AACCGAAAGT ACACAAGGGC GCGTAGTACC GATTATGGTG AAGGTAAAGG TATGAGTGTC
ACTATCCAAG ACTTAGTCTT GGACCGCAAT AACCTTAATC AGGCTTATTT GCGAGTTAAG
AGAAATAAAG GGGCAGCAGG CATTGACGAT ATGACAGTCA ATGATCTTCT GCCATATCTC
AGAGAAAATA AGACGGAATT GATCGCTAGT TTGCGTGAAG GCAAGTATAA ACCAGCACCA
GTCAAACGGG TAGAAATTCC GAAGCCTAAT GGTGGAGTAA GAAAACTCGG AATACCAACA
GTGGTGGACC GAATGGTTCA ACAAGCTGTA GCCCAAATTC TTACGCCTAT CTTTGAGCGT
GTTTTTTCTG ATAATAGTTT TGGCTTTCGT CCCCACCGTG GGGCCCATGA CGCTATTGAA
AAAGTAGTAG ATCTTTATAA TCAAGGTTAT CGAAGAGTTG TTGACTTAGA CCTAAAAGCC
TATTTTGATA ACGTTAATCA TGACTTGATG ATTAAGTATC TCCAACAATA TATTGATGAC
ACATGGACAC TAAGACTCAT TCGTAAGTTT CTAACTAGCG GAGTCTTAGA TCATGGGCTT
TTCGCTAAGA GTGAAAAAGG AACCCCACAA GGAGGGCCAT TGTCCCCACT ACTGGCGAAC
ATCTATCTAA ATGAGTTGGA CAAAGAGTTG ACTGGACGTG GTCATCACTT TGTGCGCTAT
GCGGATGATT GTAACATCTA TGTTAAAAGT CAACGAGCCG GAGAACGAGT AATGCGAAGC
ATTACCCAGT TTCTTGAAAA GCGCTTGAAA GTTAAAGTGA ACCCAGATAA AACCAAAGTC
GGTAGCCCGC TACGGTTAAA GTTTCTTGGC TTTTTGTTGG GTGTAGACCA CAATGGAGCC
TACGCCCGTC CAGCAAAACA ATCGCAACAA CGAGTAAAGA AAGCATTGAG GTTATTAACT
AAACGTAATC GTGGAATATC CCTGACAAGA ATGTTTGAAG AAATTCAGCG AAAAATGCGT
GGATGGCTTC AGTACTACTC AATTGGGAAA CTAACTGACT TTATTCAACG CCTTGACAAG
TGGTTGAGGG CCCGAATAAG ACAGTATATC TGGAAGCAAT GGAAGAAGCT TAAAACTAAG
GTAACTAACT TACAGAAGCT GGGGCTGTCC CAGCGTGATG CATATGGCTT CGCTAGTACC
TGCAAGGGCT ACTGGCGAAC TGCACACAGT AAGACCTTGA GCTATTCTCT AACTAATAGA
AAACTGGAAC AACTCGGACT TATGAATATG TCCAAGACGC TCCAGTCAAT TCAAAGTGAT
TAA
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| Protein sequence | MRQSQKTEQQ ADRLSRIGLE NRKYTRARST DYGEGKGMSV TIQDLVLDRN NLNQAYLRVK
RNKGAAGIDD MTVNDLLPYL RENKTELIAS LREGKYKPAP VKRVEIPKPN GGVRKLGIPT
VVDRMVQQAV AQILTPIFER VFSDNSFGFR PHRGAHDAIE KVVDLYNQGY RRVVDLDLKA
YFDNVNHDLM IKYLQQYIDD TWTLRLIRKF LTSGVLDHGL FAKSEKGTPQ GGPLSPLLAN
IYLNELDKEL TGRGHHFVRY ADDCNIYVKS QRAGERVMRS ITQFLEKRLK VKVNPDKTKV
GSPLRLKFLG FLLGVDHNGA YARPAKQSQQ RVKKALRLLT KRNRGISLTR MFEEIQRKMR
GWLQYYSIGK LTDFIQRLDK WLRARIRQYI WKQWKKLKTK VTNLQKLGLS QRDAYGFAST
CKGYWRTAHS KTLSYSLTNR KLEQLGLMNM SKTLQSIQSD
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