| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0218 |
|---|
| Symbol | |
|---|
| ID | 5188804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 252943 |
|---|
| End bp | 253740 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640590014 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001270825 |
|---|
| Protein GI | 148543455 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000173393 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACTT TAAGTTTTAT GCGTCACGCA TTTGTCGCTA GTACATTTAT TGCGATTATT
TGTGGAATTA TTGGAGTTTT TGTCGTTGCA CGAAATTTAT CATTCTTAAC GCATACCTTG
TCTGAAATTG GGTTTGCTGG TGGTGCTTTT GCCGTTTTTG CTGGATGGCC AGCGCTAAAT
GGGATGATTC TGTTTACAAT GTTAAGCTCA GTTATTGTTG GACAAATGAG TATAAAAGAA
TCACGGCGAG AAGCGGTTAT TAGTGCCGTT TCAGCGTTGT TCATTGGTTT AGGAATTCTT
TTCTTATCTT TGAGCAGTCA GTCAGCTAGC TCAGCAACAA GTATTTTGTT TGGTAGCGTG
GTTGGAATTA GTTTGAATGA GGTCTGGCAG CTTGTCTACC TTTCCATTCT TGTTTTGATC
ATTTTGCTAT TGATGTATCG TCGCCTTAAG TTTGATTCCT TTGATTCAAT TGGGGCGCAG
GTCAGTGGAA TAAATCAAAC AGTGATTTCT GTTGTTTTTC TTTTACTACT TGCTTTAAGC
GTTAGTGTCG CTGCTCAGAT TGTCGGTTCT TTGCTAATTT TTATTCTCCT AACGTTACCA
GCTGCTAGTG CTAAATACTT TACGCATGGT GTCGCACGGA TGATTATTTT AGCAATTTTA
TTTTCACTGT TAGGGACATG GCTTGGGCTT TTTCTCGGTT ATTTGACAGA TTGGCCGGTT
AGTTTCTTTA TCGCAGTGAT TGAAGTTATC ATCTATACCA CAGCCTTGAT TTATAGTAAA
TTTATCGAAT CGAATTAG
|
|---|
| Protein sequence | MLTLSFMRHA FVASTFIAII CGIIGVFVVA RNLSFLTHTL SEIGFAGGAF AVFAGWPALN
GMILFTMLSS VIVGQMSIKE SRREAVISAV SALFIGLGIL FLSLSSQSAS SATSILFGSV
VGISLNEVWQ LVYLSILVLI ILLLMYRRLK FDSFDSIGAQ VSGINQTVIS VVFLLLLALS
VSVAAQIVGS LLIFILLTLP AASAKYFTHG VARMIILAIL FSLLGTWLGL FLGYLTDWPV
SFFIAVIEVI IYTTALIYSK FIESN
|
|---|
| |