Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0215 |
Symbol | ipk |
ID | 5189027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 250362 |
End bp | 251213 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590011 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001270822 |
Protein GI | 148543452 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000188115 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTTA CAGAAAAAGC ACCAGCAAAA TTGAATTTGA GTTTAGATAC GCCGATGCGA TATTTTGATG GTTCTCCTCA ATGGGATATG GTAATGGTTT CGGCAGACCT GGCTGATTAT GTAACTGTTG AGACACACCG GCGCCCTGCA ACAATTAAAG TTTATACAAA TAGTGGCTTT TTACCCAATG ACCAACGTAA TTTAGCATAC CAAGCAGCTC ATATTTTACG TAGTCGTTTT CATTGTAAAG ATGGCGTTAC AATTCGAATT AAGAAGCAAA TTCCAGTCGC GGCCGGATTG GGCGGTGGCT CTTCAGATGC AGCGGCAGTT TTACGCGCAT TAAATAGTAT TTGGCGGTTG GGCTTGAGTT TATCAGAACT GGCAAAGATT GCATTAACAA TTGATTCTGA CGTCCCGTAT TGTATATATA ACAAATTAGC CCACGTTACT GGCCATGGTG AAAAAATCGA ATTGTTACCA CCGCAACCTC ATTATTGGGC TGTGATTGCA AAACAGAAGA TCAGTGTTTC TACGCCGCAA ATCTTACGAC AAATTAATTA TGAGAAGCTT CAACATCTTA ATAATGAAGC ATTACTGACA AATTTAAAGA AAGAAGATTG GCAAGAAGCA ACAAAATATA TGGGAAATGT TTTAGAGCCC TTAACGATGA AATTTTATCC AGAGATTGGT CGTCTAAAGA ATAAGATGAA AGAATTGGGG GCCGATGTTG CCCAGATGAG TGGGACGGGA CCAACCGTCT TCGCAATCTG CCATACAGAA TCGCGAGCAA AACGGATTCA AAATAGTATC CGGGGATTTT GTCGCGACGT TCATGTTGTA ACTTTGCTTT GA
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Protein sequence | MIVTEKAPAK LNLSLDTPMR YFDGSPQWDM VMVSADLADY VTVETHRRPA TIKVYTNSGF LPNDQRNLAY QAAHILRSRF HCKDGVTIRI KKQIPVAAGL GGGSSDAAAV LRALNSIWRL GLSLSELAKI ALTIDSDVPY CIYNKLAHVT GHGEKIELLP PQPHYWAVIA KQKISVSTPQ ILRQINYEKL QHLNNEALLT NLKKEDWQEA TKYMGNVLEP LTMKFYPEIG RLKNKMKELG ADVAQMSGTG PTVFAICHTE SRAKRIQNSI RGFCRDVHVV TLL
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