Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0212 |
Symbol | |
ID | 5189573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 248391 |
End bp | 248957 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590008 |
Product | ribonuclease M5 |
Protein accession | YP_001270819 |
Protein GI | 148543449 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1658] Small primase-like proteins (Toprim domain) |
TIGRFAM ID | [TIGR00334] ribonuclease M5 |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGAA TAAAAGAAGT TATAGTTGTT GAAGGTAAAG ATGATACTAA GCAAATTTTA AAAGCGGTTG ATGCCGATAC CTACGAAACA AATGGGTCTG CAATTTCAAC GGCTGACTTG GCGAAGTTGA AAAAGTTACA AGCAAGCCGG GGCCTAATTG TTTTTACTGA TCCAGACTTT AACGGGGAGC GGATTAGAAA AATAATCAGT GAAGCCATCC CAGGAGTTAA GCATGCTTTT ATTAAACGAA AAGATGGTGT ACCAACTGAG GCTCATGGTA GCTTGGGAGT TGAGCATGCA ACGCCAGCAG TTATAAAATC AGCTTTGGAG CACCTTTATA CCCAAACAAC GACACCTCAG CAAGTTTTTA AGCGAGAAGA CTTGCAAAAA TGGGGATTAA CAGGTCAAGC AGATTCACGA AAACGGCGTG AAAAGCTAGG GCAATTACTC GGAATCGGTT ATGGAAATGG GAAACAATTG ATTCACCGTT TAAACATGTT TCAAGTTGAC CGAGCAACAT TTGAACAAGC AATTAAGCAA ATAAATCAGG AGGAAGATCA TGAGTAA
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Protein sequence | MIRIKEVIVV EGKDDTKQIL KAVDADTYET NGSAISTADL AKLKKLQASR GLIVFTDPDF NGERIRKIIS EAIPGVKHAF IKRKDGVPTE AHGSLGVEHA TPAVIKSALE HLYTQTTTPQ QVFKREDLQK WGLTGQADSR KRREKLGQLL GIGYGNGKQL IHRLNMFQVD RATFEQAIKQ INQEEDHE
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