Gene Lreu_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0212 
Symbol 
ID5189573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp248391 
End bp248957 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content40% 
IMG OID640590008 
Productribonuclease M5 
Protein accessionYP_001270819 
Protein GI148543449 
COG category[L] Replication, recombination and repair 
COG ID[COG1658] Small primase-like proteins (Toprim domain) 
TIGRFAM ID[TIGR00334] ribonuclease M5 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAA TAAAAGAAGT TATAGTTGTT GAAGGTAAAG ATGATACTAA GCAAATTTTA 
AAAGCGGTTG ATGCCGATAC CTACGAAACA AATGGGTCTG CAATTTCAAC GGCTGACTTG
GCGAAGTTGA AAAAGTTACA AGCAAGCCGG GGCCTAATTG TTTTTACTGA TCCAGACTTT
AACGGGGAGC GGATTAGAAA AATAATCAGT GAAGCCATCC CAGGAGTTAA GCATGCTTTT
ATTAAACGAA AAGATGGTGT ACCAACTGAG GCTCATGGTA GCTTGGGAGT TGAGCATGCA
ACGCCAGCAG TTATAAAATC AGCTTTGGAG CACCTTTATA CCCAAACAAC GACACCTCAG
CAAGTTTTTA AGCGAGAAGA CTTGCAAAAA TGGGGATTAA CAGGTCAAGC AGATTCACGA
AAACGGCGTG AAAAGCTAGG GCAATTACTC GGAATCGGTT ATGGAAATGG GAAACAATTG
ATTCACCGTT TAAACATGTT TCAAGTTGAC CGAGCAACAT TTGAACAAGC AATTAAGCAA
ATAAATCAGG AGGAAGATCA TGAGTAA
 
Protein sequence
MIRIKEVIVV EGKDDTKQIL KAVDADTYET NGSAISTADL AKLKKLQASR GLIVFTDPDF 
NGERIRKIIS EAIPGVKHAF IKRKDGVPTE AHGSLGVEHA TPAVIKSALE HLYTQTTTPQ
QVFKREDLQK WGLTGQADSR KRREKLGQLL GIGYGNGKQL IHRLNMFQVD RATFEQAIKQ
INQEEDHE