Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0192 |
Symbol | |
ID | 5189111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 224714 |
End bp | 225778 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640589987 |
Product | ABC transporter related |
Protein accession | YP_001270799 |
Protein GI | 148543429 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.725216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACC CGATCATTGA CTTAGACAAC ATTAGCGTAA CTTTTAAGCA ACGAAAACAG GTTGTTCATG CCGTTAAGGA TGTTACCTTA AAAGTAGAAA AAGGCGATAT TTATGGGATT GTTGGTTATT CTGGAGCTGG TAAATCAACA TTAGTTCGAA CCATCAACCT CCTACAACTT CCTACTGCGG GATCAGTAAC AGTTAATGGC ACTGTTTTTT TCAAAGACCA TCAACAGCAA ATTAGTAATA AAGAGTTACA AGAAAAGCGC CGAAAAATTG GCATGATTTT TCAACACTTC AATTTATTAA ATGAAACTTC AGTAATTGAA AATGTCCTTT TCGCTCTTAA ACATACTGAC ATGGATGATG ACGCAAAAGA GAAGAAGGCA CTTGAACTTT TAGACTTAGT TGGCTTAAAG GATAAGGCTG AATTCTACCC TGTTCAATTA TCTGGTGGTG AACAACAACG GGTTTCCATT GCCCGGGCAT TAGCTAATGA TCCTGAAATC CTAATTTCTG ATGAGGCTAC TTCGGCTCTT GATCCCCAAA ACACTAATCA GATTTTGGAC CTTCTTAAAC GGCTCAACGA AAAATTAGAT TTAACGATTG TCCTCATTAC TCATGAAATG GACGCTGTTA AACGAGTAGC TAATAAGATT GCTGTCATGG AATATGGACA AATCATTGAG CGCGGCACCT TGCAGAAGGT GTTCCTCCAA CCACAACAGG ACTTAACCCG TCAATTTGTG GGAGGTTCCT TAGCCGCAAT CGATACCCTT AAAGCATTTG ACCTGGGCCA CCTTGACGAT GATGAAGAAT TGCTGCAATT GGTCTACGAT GCAAATAACG TGACTAAATC AATCATTATC GAGTTATATA AGAAGCTGCA AGTTGAAGCA AGTATGCTTT ATGGAAACAT TGAAGTCTTG GCCGGTTCAC CAGTCGGTAC CCTGTTTGTG GTTATCAAGG GCGATGCTGA TAAGCGTCAA CAAGCTATTG ACTTCTTAAA AGAAAACGAT GTTACTGTCA CAAAGATTGA TGATCGGAGG ATTTGGAATG AATAA
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Protein sequence | MANPIIDLDN ISVTFKQRKQ VVHAVKDVTL KVEKGDIYGI VGYSGAGKST LVRTINLLQL PTAGSVTVNG TVFFKDHQQQ ISNKELQEKR RKIGMIFQHF NLLNETSVIE NVLFALKHTD MDDDAKEKKA LELLDLVGLK DKAEFYPVQL SGGEQQRVSI ARALANDPEI LISDEATSAL DPQNTNQILD LLKRLNEKLD LTIVLITHEM DAVKRVANKI AVMEYGQIIE RGTLQKVFLQ PQQDLTRQFV GGSLAAIDTL KAFDLGHLDD DEELLQLVYD ANNVTKSIII ELYKKLQVEA SMLYGNIEVL AGSPVGTLFV VIKGDADKRQ QAIDFLKEND VTVTKIDDRR IWNE
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